Dendroctonus ponderosae (mountain pine beetle): 109546407
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Entry
109546407 CDS
T04899
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03013
Nucleocytoplasmic transport
dpa03015
mRNA surveillance pathway
dpa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109546407
09122 Translation
03013 Nucleocytoplasmic transport
109546407
03015 mRNA surveillance pathway
109546407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109546407
03041 Spliceosome [BR:
dpa03041
]
109546407
Messenger RNA biogenesis [BR:
dpa03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
109546407
Spliceosome [BR:
dpa03041
]
Common components
Common spliceosomal components
Cap binding complex
109546407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
AATF-Che1
Motif
Other DBs
NCBI-GeneID:
109546407
NCBI-ProteinID:
XP_019772919
UniProt:
A0AAR5QGW1
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MSRRRPHEEDDGYDRAYRKRRRVSENQEIEDRLESLILCVGEKSTSSLESNLEGLASVLE
ADLSTYRAKILRILTDCAIRMPEKCTIYTTLVGLLNAKNFNFGGEFVEFMVKTFKEALKA
CKWDPARFLLRFLADLVNCHVISATSLLQLLDNMIDAANEDSVPQVRRDWYVFAILSTLP
WVGRELYEKKEQPLEHLLVQIEVFLNKRPKKHHNALKVWAVDTPHPQEEYLDCLWAQIRK
LRQDNWAEKHIARPYLAFDSILCEALQHNLPSILPPPHHDSYKYPMPWVVFRLFDYTDCP
EGPILPGAHSIERFLIEEHLHSIIEMYHLERKDCATHLLNFPYKLKIPLEYCIVEVIFAE
LFHMPSPRYLDICYGSILIELCKLQPSTMPQVLALATEMLFHRIDSMNVSCFDRFVCWFS
YHLSNFQFRWRWDDWDVCLSLDSEHPKPKFVREVMLKSMRLSYHQRIREILPETFAGFIP
QKPEPEYKYAKEAEAVTLPGTAAAHQLVVTIRQKCTPEEVLAVLKDLPNPRSEEEVDGRF
NPLKIDVFVQTLLNLGSKSFSHSFAAISKFHYVFKILAESEEAQICILRNMFELWHNHQQ
MMVVLVDKMLKTQIVECSAVANWIFSKEIGSEFTKNYLWEILHLTIKKMNRHVTKLTGEL
TEAREKLARAEESSDSESDEEKKKQEDAEKPSEEMVERMEEKLEAAQADQKNLFLIIFQR
FIMILSEHLVRCDTDGKDYNTHWYKWTIGRLQQVFLAHHEQVQKYSSTLETLLFTQDLDP
HILEIFQQFVSLQG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtagacgaaggccccatgaagaggacgatggttatgatcgtgcctataggaaacgg
cgtagagtttccgaaaatcaagaaattgaagatcgtttggagtctctaattttgtgtgtt
ggagaaaagagtacatcgtcattagagtccaatttggagggattagctagtgttcttgaa
gcggatttaagtacctacagagcgaaaattctgcgaattttaaccgactgtgcaattcga
atgccagaaaaatgtactatttatactacgttggttgggctccttaacgcaaaaaatttc
aattttggaggagagtttgtcgaattcatggtaaaaacgtttaaagaagctcttaaagcg
tgtaaatgggaccccgctcgttttttgctcagatttttagctgatctggtaaattgtcat
gttatcagtgccacatctttgctgcaattgttggataatatgattgacgccgctaatgaa
gacagtgttcctcaggtccgcagagattggtatgttttcgcgattctatccactctccca
tgggttggtagagaattgtatgagaagaaagaacaaccccttgaacatttactggtacaa
atcgaagtatttctgaacaaaagaccaaaaaagcaccataatgctttaaaagtttgggct
gttgataccccacacccacaagaagaatatttagattgcctctgggcgcaaattagaaag
ttgagacaagataattgggcagaaaaacatattgcgcgcccatacttggcatttgattca
attttatgtgaggccttacaacacaacttgcccagcattttgccgccacctcatcatgat
tcttacaaatatccgatgccatgggtggttttccggctttttgattacactgactgccct
gaaggcccaatcttaccaggggcccattctattgagagatttttaattgaagagcatctg
cattcgatcattgaaatgtatcatctcgaacgcaaagactgtgctacccatttattaaac
tttccatataaacttaaaatcccattggaatattgcatagttgaggtcatatttgcggag
ctgtttcatatgccgtctccacgatatctcgatatatgttatggatcaattctgatagaa
ctatgcaagcttcaacccagcactatgccccaagttttagctctcgccactgaaatgctt
ttccacagaatcgactcgatgaatgtttcctgctttgacaggtttgtctgttggttttct
taccatctaagcaactttcagtttagatggaggtgggatgattgggacgtgtgtttgagt
ttggattcggaacatccgaaacctaaatttgttagagaagtgatgcttaaaagtatgagg
ttgtcttatcatcagagaatcagagaaattctcccagaaacctttgcgggctttataccg
cagaagccagaacccgaatataaatatgccaaggaagcagaagctgtgactctacctgga
acagctgcagctcatcagttggttgtaacaattcggcagaagtgtacccccgaagaggtt
cttgcagttctcaaagatcttccaaaccctcgatccgaagaggaagttgacggtagattt
aatccgttgaaaattgatgtttttgtgcaaacattattgaatttggggtctaaaagtttt
tctcatagctttgcggctatttcgaaatttcactatgtcttcaagattttagcagaatcc
gaagaagctcaaatatgcattctgagaaatatgttcgagttgtggcacaaccaccaacaa
atgatggtggtattggttgacaaaatgctaaaaacgcaaattgtggagtgttcagcagta
gcaaattggattttctcgaaagaaattggttcagaattcacaaagaattatttatgggaa
attttacatttgactatcaaaaagatgaatagacatgtaacaaagttgactggtgaactg
acagaggcgagggaaaaattggcaagagcagaggaatcaagcgatagcgagagcgatgaa
gagaaaaagaaacaggaagatgcagaaaaaccctccgaagaaatggtggagcgaatggaa
gaaaaattagaggcagcacaagcggatcaaaagaatctatttttaatcatcttccaaaga
tttatcatgatcctctccgaacatctggtccgctgcgatactgacggaaaagattataat
acccattggtataaatggaccattggaagattgcaacaagtctttttggcgcatcacgaa
caagtgcaaaagtacagttctactttagaaactctactattcactcaagatttggaccct
cacattctggagattttccaacagtttgtctcactacaaggttaa
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