Dendroctonus ponderosae (mountain pine beetle): 109546525
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Entry
109546525 CDS
T04899
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa04120
Ubiquitin mediated proteolysis
dpa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109546525
04120 Ubiquitin mediated proteolysis
109546525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpa04121
]
109546525
Enzymes [BR:
dpa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109546525
Ubiquitin system [BR:
dpa04121
]
Ubiquitin ligases (E3)
U-box type E3
109546525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
109546525
NCBI-ProteinID:
XP_019773064
UniProt:
A0AAR5QIL0
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MSELSQEEIRRRRLARLAALENGSPSNSISPPITPISQSPMSTTQGPSPPIFDSQGNSLD
NKFFSPGAVAAQGLKKDNSLGALGSDLKVRTDSEGVFKEPSKPIDIQLPSSSKQRTRAPP
VRSDSETSSIHMEVDEVSGCADKLAGNTDIDSGFENMESTPVFQVDESDLLKKDVHRQRT
SSSSTELNVEQLQETIARILLVSFTRTSTTRVFLPLSAELVKETPQLSIRDLTSTAIMEI
LSMIKKGNDPFASITPLNQDITDTYSLHSGSVSPVQSSPSSSEMQCPVPALIMREKIENE
TPIKLAIDFLMDSYNRVAQEERNHPKRSSIPPLSDVLIEIRAQLIQYTTLVVQGIIVPKT
EDADEKSPLLNSIVHQTFPRGFLIELVTRTHTSPELFSKVFSPILQGILRLMRSSCMVDD
QHSYTYRLPLQALFELADIRCGNRPICSLIVKQPQFNLAEPLTNAGGREMSLLSFLGPFL
DISVFAEDQPKVAEKLFSGNSINDNTLKMGLQLEVEHIRNTLHRIFHYLLANQDSRDSCL
NYIQTVLKRNEKRAQLAMEERQLAGDGFMLNLLSVLQNLSLKIKFNKMDMMYPFHPNTMI
VIQNETRLKFSSQEVADWLQEFNKSYEFHSPNFSTTCWFLTLYCHHLSILPAIQKYQRRL
RAIRDLQKLVDETTASEAQWKNTAFASRNKQFIKRWKQQLKKLNKSKACADAGLLDYNLI
RRTLIFYTSVSEYLLSLMTGAAPRSAVPDLPLPPPQSPAYYAMPEWYVEDIAEFLLFALQ
YFPSVIAENTEDTLISWLLVTVCSSHMVKNPYLVAKLIEVIFVIIPSIQPRCEPLYIRLM
SHHITCTVLPSSLMKFYTDVETTGSSSEFYDKFSIRYHISVIIKGMWGSPVHRQAVVDES
KSGNQFVKFINMLMNDTTFLLDESLESLKRIHDIQLLIADDDKWSKMPQDQQQSRIRQLT
ADERQCRSYLTLARETVDMFHYLTVDIKEPFLRPELAGRLASMLNFNLQQLCGRKYKDLK
VENPDKYGWEPRRLLSQLIDIYLHLDCDTFAEALASDERSFSRQLFTDAASIMERVSIKT
AVESEQFRELAEKACRVVERNQKSDELHEDAPDEFKDPLMDTLMTDPVLLPSGQIMDRAV
IMRHLLNSNTDPFNRQPLTEDMLLPVHDLKEKIRIWRSEKSKSGMN
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctcagccaagaggagattcgccgacgccgtttggcccgtctggccgctttg
gaaaatggttctccctcgaattccatatctccgcccatcacgccgatttctcaatcgcct
atgtccaccacgcaaggaccaagtccacctatattcgactctcaaggaaactcattggat
aataaattcttctcacctggtgccgttgcagctcagggactgaagaaagataatagtctc
ggagcattgggttcggacttaaaagttcgaacagatagtgagggcgtgtttaaagagccc
tcgaagcctatagacattcaactaccatcaagttccaaacaaagaactagagcacctccg
gtgagaagcgattcggaaacaagttcaatacatatggaagtggatgaagtaagtggatgt
gctgataagttggccggaaataccgatatagattctggatttgaaaatatggaatcaaca
cctgtctttcaggttgacgaatcagacctgctaaagaaagacgtccaccgacagcgcacc
agttcttcttcaacagaattaaatgtagaacaacttcaagaaacaattgcccgaatactt
ctagtctcattcactagaacgtccacaacacgagtattcctccctctgtctgcggagctt
gttaaagaaactccacaattaagcattcgagatcttacatcgactgccattatggaaata
ttgtcgatgattaagaaagggaacgatccgtttgcgagtattacgccactcaatcaagat
attaccgatacatacagcttacactcaggctcagtgagtccggtgcaaagtagtccgagt
tccagcgagatgcaatgtccagttccagctttgattatgagagagaaaattgaaaatgaa
actcctattaaattggcaatagatttcctcatggattcttataacagagtagctcaagaa
gaaagaaatcatcctaaaagatccagcattccacccctaagtgatgttttgatcgaaata
agagctcagcttattcaatacaccactttggtcgttcagggtattatagtaccaaaaacc
gaagatgcggatgaaaagtcgccgcttctcaattctatagttcatcaaacatttcctaga
gggtttttgattgagctggtaacgcgtacacatacaagccctgagctatttagcaaagtg
ttctctccaatactacaaggcatattgagattaatgcgaagttcttgtatggttgacgat
cagcatagttacacctacaggttgccgctgcaagctttgtttgaattagctgacatcagg
tgtggcaataggcctatatgtagtctgattgtaaaacagccgcagtttaatttagctgaa
cctcttacaaatgccggtggccgcgaaatgtccttgttgtcgtttttgggacctttcttg
gatatttctgtatttgctgaagatcaacccaaagtggcagaaaaattgttttcaggaaat
tcgataaatgacaacactttaaaaatgggattgcaacttgaagtagaacatattcgtaac
actcttcatagaatattccactacttacttgcaaaccaagacagtagagatagttgtttg
aattacatacaaaccgtattaaaacgtaatgaaaagcgagctcaacttgcaatggaggaa
cgtcaactagcaggagatggttttatgttgaatcttttgagtgttttacagaatttatct
ctgaagataaaatttaataaaatggatatgatgtaccctttccacccaaacacaatgatt
gtcatacaaaacgaaacgaggctgaaattttcatctcaagaagtagccgattggcttcaa
gaatttaacaaatcatacgaattccattcacctaatttttccaccacctgttggttccta
acgttatactgccatcatttgtcgatattaccagctattcaaaagtatcaacgtagactt
agggcgattcgtgacctgcaaaaactggttgatgagaccacagcttcagaagctcaatgg
aaaaacactgctttcgctagcaggaataaacagtttattaaaagatggaagcaacaattg
aagaaactcaacaaatcgaaagcttgtgcagatgcaggcttgttagattataacttaatt
cgtcgcactttaattttttacacgtcggtgagcgagtacttgttgagtttaatgactgga
gccgctccgagatctgctgttccagatttgccactgcctccaccacaatctcccgcgtac
tatgcaatgcccgagtggtacgtcgaggatatagcggaattcttattattcgctttgcaa
tacttccctagtgtaattgccgagaacactgaagatacactaatcagctggctgttagtg
acagtgtgttcttcacatatggttaaaaatccgtatctcgttgccaaactgatcgaagtg
atatttgtgataattcccagcattcaaccacggtgtgagcccctttacattaggttaatg
tcccatcatattacctgcacagttttgcctagttctttaatgaaattttatacagatgtg
gaaactaccggttccagttcagagttttacgataaattttctattaggtaccacataagt
gttattattaaaggtatgtggggttccccagttcatcgacaagctgtggtcgatgaatca
aaaagcggcaatcagtttgttaaatttattaacatgctaatgaacgatacgacattttta
ctagacgagtccttggaatctttgaaaagaattcacgatattcagttactgatagccgat
gatgataaatggtcaaaaatgccccaggatcaacaacaaagtcgtataagacaattgact
gctgatgagagacaatgtcgctcctatttaacattagcacgtgagacggttgatatgttc
cactatttgactgttgatatcaaagagccgtttttgagaccggaattggccggcagattg
gcatctatgctcaatttcaaccttcagcagttgtgcgggcgcaagtataaagatttgaag
gttgaaaatcctgacaaatatggttgggagccgcgaagactcttaagtcaattaattgac
atatatttgcacttagactgtgatacttttgctgaggcactcgccagcgacgagagatcc
ttcagccgacaactttttactgacgctgcttccattatggaacgggtttccatcaagact
gcagtagagagcgaacaattcagagaattagctgaaaaagcctgccgagtagttgaacgc
aaccagaaatctgatgaattgcatgaagatgctccagatgaatttaaagaccctttaatg
gatacgttgatgacagacccggttctgctaccaagcggacaaatcatggatcgagctgtt
attatgagacatttattaaatagtaatacagatccatttaatagacagcccctaaccgag
gatatgctgttacctgtacatgatctcaaagaaaaaattcgaatatggaggtctgagaaa
tccaaatcaggcatgaactga
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integrated database retrieval system
