Dendroctonus ponderosae (mountain pine beetle): 125502859
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Entry
125502859 CDS
T04899
Name
(RefSeq) ATP-dependent RNA helicase Ddx1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpa03041
]
125502859
03016 Transfer RNA biogenesis [BR:
dpa03016
]
125502859
Enzymes [BR:
dpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125502859
Spliceosome [BR:
dpa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125502859
Transfer RNA biogenesis [BR:
dpa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
125502859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
CTLH
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125502859
NCBI-ProteinID:
XP_048518248
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MAAFEEFGVLPELAKAIEELEWTLPTDIQAESIPLMLGGGDILMAAETGSGKTAAFCLPI
IQIVWETLKDIQSGKASKAATAISPAWTLSTHDRGNALAVAPDGLRVQSRDVKDWHGVRC
TRGISGGGKWGFEATIADEGLCRMGWATLNATLELGTDRFGWGFGGTGKKSNNRKFDTYG
TAFGKSDVITCLVDLDAGEISFMKNGTHLGLAFSGVNTKEPVFPAAVLKNAEMSFNFGDH
PFKHNLPEKFLPLASAPKDKVVMNTNTGSGSSDGLVKLANNAPQALIIEPSRELAEQTSN
QIKLFKKYIENPCIKDLLVIGGSNIKEQMSILQNSGVDIVVGTPGRLEDLIQGGYMSLAN
CRFFVLDEADGLLKQGYTDFIERLHKQMPKITADGKRLQMIVCSATLHDFEVKKMAQKLM
HFPTWIDLKGEDAVPETVHHVVVQVDPQNDRTWQNIRKHITTDGVHHQDNVKPGDNSPET
LSEAVKILKGDYVVKAIMEHQMDKAIIFCRTKLDCDNLEQYLKEIDPSYTCVCLHGDRKP
HERKANLELFKNNEVKFLICTDVAARGLDIVGLPFMINVTLPDEKSNYVHRIGRVGRADR
MGLAISLVSTVPEKVGKILKNKNN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttttgaagagtttggtgttctgcctgagcttgcaaaagccattgaggagctg
gaatggactctgcccacagatatccaagccgaaagtattcctctgatgcttggaggtggc
gacattctcatggctgctgagactggctcgggaaaaactgccgccttctgcctgccaatt
atccaaatagtttgggaaactctaaaggatattcagtcgggaaaagccagcaaagctgca
actgccatctctcctgcttggacgttgtccactcacgatcgaggtaacgcgcttgctgtc
gcccccgacggtttacgggtgcaatcccgcgatgttaaagactggcacggagtcaggtgc
accagaggcataagtggaggcggaaaatggggctttgaagccaccatcgcggatgagggc
ctttgccggatgggctgggccactttgaatgccactctggaattgggaactgatagattt
ggttggggctttggaggcaccggcaagaagtcaaacaaccgcaaattcgatacttatggc
acagcttttggaaagtccgacgtaatcacttgtctggtggatttggatgctggcgaaatt
agctttatgaagaacggcactcatttggggctggctttttctggtgtcaatacgaaagag
cccgtgtttccggccgctgttttaaagaatgcagaaatgtcgtttaactttggcgatcac
cctttcaagcacaatttgcccgagaagttcctacctttagcgtccgccccaaaagacaaa
gtggtgatgaacactaacacaggcagtggaagcagcgatggactcgtcaaactggcgaat
aacgcgccgcaagccctcataattgaaccgtcccgcgaactggccgagcaaaccagcaat
cagataaagctctttaagaaatacattgaaaatccctgcattaaggacctgctggttatt
ggcggctcgaatatcaaggagcagatgtcgattttgcagaactccggggtggatattgtg
gttggaacccctggccgattggaggatttaattcaaggcggatacatgtcgttggcgaat
tgcaggtttttcgtgctggacgaagcagatggcctgctcaagcagggttacactgatttc
attgagcgactgcacaagcaaatgcccaaaatcactgcggatggcaaaaggctgcagatg
atcgtttgcagtgccactttgcatgattttgaggtgaagaaaatggcccaaaaattaatg
cacttccccacttggattgacttgaaaggcgaagacgctgttcccgaaactgtccatcat
gtggtggttcaagtggacccgcaaaatgatcgaacctggcaaaatattcgaaaacacatc
acaactgacggtgtgcaccaccaggacaacgtgaagcctggcgataacagtcccgaaacc
ctgagtgaagcagtgaaaatccttaagggcgattatgtggtaaaggcgataatggagcac
cagatggacaaggcgatcattttctgccgcaccaagttggactgcgacaatctggaacaa
tacttgaaagaaatcgatccgtcctatacgtgcgtgtgtctgcatggtgaccgcaagccg
cacgaacggaaggccaatttggagctttttaaaaacaatgaagtcaagttcctcatttgc
accgatgtggctgccagaggcctggatattgttggcctacctttcatgatcaacgtgact
cttcccgacgaaaagtcgaattatgtgcaccgaattggcagagttggacgagccgatcgc
atgggattagccatcagcttggtcagcactgttccagaaaaggtaggcaaaattttaaag
aacaaaaataattga
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