KEGG   Dendroctonus ponderosae (mountain pine beetle): 125503587
Entry
125503587         CDS       T04899                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
dpa  Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125503587
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpa03041]
    125503587
Spliceosome [BR:dpa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    125503587
 Complex C
   U5 SnRNP specific factors
    125503587
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_IFT140_1st eIF2A WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_Nup120_160 WD40_like Beta-prop_NOL10_N PAN2_N
Other DBs
NCBI-GeneID: 125503587
NCBI-ProteinID: XP_048520247
UniProt: A0AAR5QDU0
LinkDB
Position
Unknown
AA seq 349 aa
MVADNKRKADESALVPVQKKSKQDVALTSKNKQVSQLQPAPARTSNLFAPIMVCEGHEGE
IFSVDFHPEGQYFATSGFDRKIFLWGVYGECDNISVMTGHTGSITELHFTTDGANIVTAS
TDYTLGLWDIVTGQRVKRFKGHTAFANCAQPSRRGPQMIVSGGDDSTVRLWDQRKKQCAG
TMNSVYQTTAVCFNDTAETVFSGGVDNDIKVWDTRKKEITYAMKGHTDTITGLALSNDGS
YLLSNSMDNTLRIWDVRPFAPVERCVKIFSGHQHNFEKNLLRCAWSPDGNKVSGGSADRF
VYIWDTSSRRIIYKLPGHSGCVNSVAFHPNEPIVVSVGSDKMVYIGEID
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggtagcggataataagaggaaagccgatgaatcggctctcgtgccagtgcagaagaag
tcgaaacaagacgtggccctcactagcaagaacaaacaagtcagccagcttcagcctgcc
cctgcacgtacgtcgaacctttttgcccctattatggtctgtgagggccatgagggcgaa
atattttcggtagatttccaccccgaaggacagtactttgccacatccggtttcgaccgc
aagatatttctatggggcgtctatggggaatgcgacaatatttccgtaatgactggacat
acaggatcaataacggagctgcactttacgaccgatggagccaacattgtgactgcttct
accgactacacgttggggctatgggatattgttactgggcaaagagtgaagcgattcaaa
ggacatacagcgttcgcaaattgcgcacaaccctcccgaagggggccccagatgatcgtg
tcagggggtgacgacagtacagtcagactatgggaccaaaggaagaaacaatgcgccgga
accatgaactctgtttatcaaacaacggcggtttgctttaacgacacagccgagactgtt
ttcagtggaggcgtcgacaatgatattaaggtttgggatactcgcaagaaggaaatcact
tacgccatgaaaggacacacggatacaatcacaggattggcgttgagcaacgatggctca
tacttgctgagcaattcaatggacaacactttgcgaatttgggacgtcaggcccttcgct
ccagtggaacgatgcgtgaaaatcttcagtggacatcagcacaacttcgagaagaacctg
ctgagatgtgcctggtcgccagatggcaataaggtgagcggaggctcagctgatcgattc
gtgtacatttgggacacctcgtccaggcgaatcatctacaaactgcctggacacagtggc
tgtgtgaatagcgtggctttccaccccaacgagccaatcgttgtgtcagtaggaagcgat
aaaatggtgtatattggagaaattgattag

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