Candidatus Babela massiliensis: BABL1_gene_128
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Entry
BABL1_gene_128 CDS
T02948
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dpb
Candidatus Babela massiliensis
Pathway
dpb03030
DNA replication
dpb03430
Mismatch repair
dpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BABL1_gene_128 (dnaE)
03430 Mismatch repair
BABL1_gene_128 (dnaE)
03440 Homologous recombination
BABL1_gene_128 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpb03032
]
BABL1_gene_128 (dnaE)
03400 DNA repair and recombination proteins [BR:
dpb03400
]
BABL1_gene_128 (dnaE)
Enzymes [BR:
dpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BABL1_gene_128 (dnaE)
DNA replication proteins [BR:
dpb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BABL1_gene_128 (dnaE)
DNA repair and recombination proteins [BR:
dpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BABL1_gene_128 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
RbmA-like_FnIII
Motif
Other DBs
NCBI-ProteinID:
CDK30993
UniProt:
V6DJE0
LinkDB
All DBs
Position
complement(999937..1003389)
Genome browser
AA seq
1150 aa
AA seq
DB search
MSKHFTNLHLHTEYSLLDGAIAIDKLIKFGKQNNFKALCMTDHGNIFGAVRFFAQAKKAQ
IKPILGIEAYFTQDVKLKDAENKYYHLILLVENAIGYKNLCKLISYSYQEGFYFKPRIDY
RILEKHSEGLIATSACLGGHIPSLLMQNNEQEAEKKIDWFLDVFGPERFYLEVQPEDQKE
QIILNQKIFEISKKKNIECVATGDCHYILPDDREAHEVMLSIQTHHKITDANRFTFGDCR
VHIRTEQEMLNIFSQHESAVWNSGKIADMCNFDFETGKLFFPQFEIPQQITQEEFFKNLC
QEGFKKLIEKGSIDSDKIEIYQKRLDLEVSLITKMGFIGYFLVVSDFIKWAKINNIPVGP
GRGSAAGSIVAWSLEITDIDPIKYNLLFERFLNPERISMPDIDIDFCIEGRDKVINYVKD
KYGHDKVCQIITFGTMMAKGVIKDVARALGFPFEDSNAITELIPDQLKITLEEAIDQEPR
LKKLIESNSKVAHIFNLALRLEGLTRHASKHAAGIVISPEPISDVLPVYIPPKSTDLVTQ
YAMTELESLGFLKMDFLGLKNLTLIKNTLDLIKRNHNIEIDISKIPIDDKKAYDLMSAGK
TSGVFQLESDGIKDVLIRLQPEVFEDVIAVNALYRPGPLGSGMVDDFIERKHGRQKIVYL
FDELESILKETYGVIVYQEQVMKIASTIAGYSLGESDILRRAMGKKKADVMEEQRAIFTT
KAIENNFDGKKAGELFDLMAYFAGYGFNKSHSAAYALIAYQTAYLKANYCAEFMACLISL
ESSDAEKMSFYLQEAKELGIDILPPDINYSEKDFTVINNQLRFGLSGIKNVGTAAISNIQ
ETLYEKTSDKKLFKDLFDFCKRVDLRVCNKKVIESLICSGALDSLPGNRAQKFEELNKII
DLALEKKKEELTGQMGLFDIFAKAKSKDEFAATTYNFQLKEEWPDNIKLEKEKELLGIYI
SAQPLDSYKKEIKWTKVSNLSDLHNINDEKLITCCGIVKSNRTITTKKGDPMAFILIEDY
TSKAEIVVFPKLFNKVEPWLKNYNIFIVKGIIDPTSNKLIKIKAQSIVPIDLIFEESISN
KLTLNLKDNTNEKSIIKIKESIIFGSSTLEIKFKENEQLVKIEAKDKIKISKELLEIIEQ
ENIETQIDIV
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacattttactaatttgcatcttcatacggaatattctctgcttgatggtgct
attgcaatagacaaattaatcaaatttggaaaacaaaataattttaaagctctatgtatg
accgatcacggtaatatatttggtgcagtaagattctttgctcaagctaaaaaagcccaa
ataaagcctattttaggaattgaagcttattttactcaagatgttaaattaaaagatgca
gaaaataaatattatcacttgattttattggttgaaaatgcaattggttacaaaaatctt
tgtaaattaatctcttattcatatcaagaaggtttttactttaaacctagaatagattat
agaattttagaaaaacattctgaaggattaattgctacttctgcttgtcttggagggcat
ataccaagtttacttatgcagaataatgaacaagaagctgaaaaaaaaatagactggttc
ttagatgtttttgggcctgaaagattttatttagaggttcagccggaagaccaaaaagaa
caaataatactcaatcaaaagatttttgaaataagtaagaaaaaaaatatagagtgcgta
gcaactggcgattgtcattatattttacctgatgatagagaagctcatgaggttatgtta
tctattcagactcatcataagataacagatgccaatagatttacatttggtgactgtaga
gtacatataagaactgaacaagagatgttgaatatattttctcaacacgaaagtgcagtc
tggaacagcggtaaaattgccgatatgtgtaactttgattttgaaacaggaaaattattt
ttccctcaatttgagatccctcaacaaataactcaagaagaattttttaaaaatttatgt
caagaaggatttaaaaagttaatagaaaaaggctctatagattcagataaaatcgaaata
taccagaagcgattagatttagaagtctctcttattactaaaatgggctttataggatat
ttcttagttgtaagtgactttattaaatgggcaaaaataaataatataccagtaggacca
gggcgcggttcagctgctggatctatagttgcttggtctttagaaattaccgatatagat
cctattaagtataatttactttttgaaaggttcttaaatcctgaacgtatctccatgcct
gatatagatatcgatttttgtatagaaggtcgagataaagtaataaattatgtaaaagat
aagtacggacatgataaagtttgccaaataattacatttggaactatgatggcaaaaggt
gtaataaaagatgttgctcgtgcacttgggtttccttttgaggattctaatgcaattact
gaattaattccagatcaacttaagattacacttgaagaggctatagaccaagaaccgaga
ttaaaaaaattaatagaaagcaactctaaagtagctcatatctttaacttagctctcaga
ttagaaggccttactcgtcatgcatctaaacatgctgcaggtatcgttatatctccagaa
ccaatatctgatgtattaccggtttatatacctcctaaaagtactgatttagtaactcaa
tatgcaatgacagagcttgaaagcttaggctttctaaaaatggactttttaggattaaaa
aacttaactttgataaaaaatacattagatttaattaagagaaatcataatatagaaata
gatataagcaaaataccaatagatgacaaaaaagcttatgatttaatgtctgccggaaaa
acatcaggagtattccagttagaatctgatggcattaaagacgttctaataagattacag
ccagaggtctttgaagacgttattgcagtcaacgctttatacagaccaggacctcttgga
tcaggtatggtcgatgattttattgagagaaagcatgggcgccaaaaaatagtatatctg
tttgatgaacttgaaagtattttaaaagaaacttatggggtaatcgtttatcaagaacaa
gtaatgaaaattgcatctaccattgccggttattctttaggagaatcagatatcttaaga
agagcaatgggtaagaaaaaagcagatgtaatggaagaacaacgtgctatttttacaaca
aaagctatagaaaataactttgatggtaaaaaagctggagagctatttgatttaatggcc
tattttgctggttatggttttaacaaatctcactcagctgcttatgctttaattgcttat
caaactgcttatttaaaagccaattactgtgctgaatttatggcttgtttaatatctcta
gaatcatctgatgctgaaaaaatgtctttctacttacaagaagcaaaagaactgggtatc
gatattttacctcccgatattaattattctgaaaaagattttactgttattaataaccaa
ttaagatttggcctaagcggtattaaaaacgtaggaacagctgctatttctaatatacaa
gagactttgtatgaaaaaacctctgataaaaaactctttaaagatctatttgatttttgt
aaaagagtagatttaagagtatgtaataaaaaagtaatagaaagtttaatttgttcagga
gcacttgatagtttacctggaaatagggctcaaaaatttgaagagctaaataagataatc
gacttagctcttgaaaagaaaaaagaagaattaacaggacagatgggtctctttgatata
tttgcaaaagccaaatcaaaagatgaatttgcagctactacttataactttcaattaaaa
gaagaatggccagataatataaaattagagaaagaaaaagaacttcttggaatatatatt
agtgcacagccccttgatagttacaaaaaagaaatcaaatggactaaagtatctaattta
tcagatctgcataacataaacgatgaaaaattgattacatgctgtggaatagttaaaagc
aataggactataacaactaaaaaaggcgatcctatggcatttatcttaatagaagattat
acatcaaaagctgaaatagttgtctttcctaaactatttaataaagtggagccatggttg
aaaaattataatatatttatagtcaaaggaattatagatcctacttctaataaattaatc
aaaatcaaagctcagagtattgttcccatagaccttatatttgaagaaagtatatctaat
aagttaacattaaatttaaaagacaatactaacgaaaaatctattataaaaattaaagaa
agtataatttttggatcttcaacgttggaaatcaaatttaaagaaaatgagcaattagta
aaaatagaagctaaagataaaataaaaataagcaaagagttacttgaaataatagaacaa
gaaaatatagaaacacaaatagatatagtttaa
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