Candidatus Babela massiliensis: BABL1_gene_349
Help
Entry
BABL1_gene_349 CDS
T02948
Symbol
truA
Name
(GenBank) Pseudouridylate synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dpb
Candidatus Babela massiliensis
Brite
KEGG Orthology (KO) [BR:
dpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpb03016
]
BABL1_gene_349 (truA)
Enzymes [BR:
dpb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BABL1_gene_349 (truA)
Transfer RNA biogenesis [BR:
dpb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BABL1_gene_349 (truA)
Prokaryotic type
BABL1_gene_349 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
USP47_C
DUF2344
Motif
Other DBs
NCBI-ProteinID:
CDK30666
UniProt:
V6DJH3
LinkDB
All DBs
Position
620960..621709
Genome browser
AA seq
249 aa
AA seq
DB search
MKTYKIVVSYDGTDYYGWQIQPDKVTISHMLEKQFKAVFKKNIKIIGASRTDSGVHALGQ
VAKFETDINIKPEILIKAWNNLLPSNILIRSIELVNSEFHPRAKVKQKTYYYNFTTQKAI
PLISNYVYSLKSYRHSIDFDKLKVALNIFVGTHDFRSFCTGYEQESTIRTIDSISLVYLK
RYKIYQIQVKGKSFLRYMIRRIVGACLEIANSKKRNINELKVALKKPNPEQNLFTAPANG
LILRKIIYF
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacttataaaattgttgtctcctatgatggaactgattactatggttggcaaatt
caacctgacaaagtaactatttctcatatgcttgaaaagcaatttaaagctgtttttaaa
aaaaatataaaaattatcggtgcatcacgcaccgattctggtgttcatgctcttgggcaa
gttgctaaatttgaaaccgatatcaatataaaaccagaaattttaattaaagcttggaac
aatttgcttccaagcaatattttaattagatctatagagctagttaattctgagtttcat
cctagagctaaagtaaaacaaaagacttattactataattttacaacacaaaaagctatt
cctttgattagcaattatgtctattcattaaaatcttatagacattcaatagattttgat
aaactgaaagtagctcttaatatatttgtaggtacacatgatttcagatcattctgtaca
ggttatgagcaagagtctactataagaacaatagattccatatctttagtatatctcaaa
agatataaaatctatcaaatacaagttaaaggcaaatcatttttacgctatatgattaga
agaatagtgggtgcttgtcttgaaatagctaattctaaaaaacgaaatattaatgaatta
aaggtagctcttaaaaaacctaatcctgaacaaaatctatttaccgctcctgctaatggt
ttgattttaagaaaaataatatatttttag
DBGET
integrated database retrieval system
