Candidatus Babela massiliensis: BABL1_gene_549
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Entry
BABL1_gene_549 CDS
T02948
Symbol
csd
Name
(GenBank) Selenocysteine lyase/Cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
dpb
Candidatus Babela massiliensis
Pathway
dpb00450
Selenocompound metabolism
dpb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dpb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
BABL1_gene_549 (csd)
Enzymes [BR:
dpb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
BABL1_gene_549 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
BABL1_gene_549 (csd)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CDK30469
UniProt:
V6DG03
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All DBs
Position
complement(422934..424142)
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AA seq
402 aa
AA seq
DB search
MLNIRKDFPYLKSKELDSIIYFDNASTSQKPYQVIEAISNYYAYHNAPVHRGIYSKSEQA
TTLYEESRETVSKFIGADKDEIIFTKGTTEGINFIAQSWASYNLKPGDEIIISKLEHHSN
ILPWIRLMQEKDIVLKYIPITNNFELDYKAYTKLLSNKTKLVSITSCSNAVGSITDLDFI
IKHAKVYNAKVLVDAAQTIGHRDFNLKNLNIDFLAFSGHKILGPTAIGVLYISKDMQKEV
RPYQLGGGMVLDVNDYDFISLNPPNCYQAGTPAIAQAIGLSQAIKYISDNIDYDLLKKHE
SALCAYLIQELSKFDHIKILGPKDQLSNSGHIVSFVSTLYHPHDIAFYLDQFNIAVRAGN
HCAQPLFKNIGINGSVRASFYIYNTFEEVETLVKALNKLFRK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatataagaaaagattttccctacttaaaatcaaaagagttagattctattatt
tactttgataatgcatctacttctcaaaaaccttatcaagttatagaagctatatctaat
tattatgcatatcataatgcgcctgttcatagaggaatttattccaaatctgagcaagca
actactttatatgaagagtcaagagagactgtttctaaatttataggtgctgataaagat
gaaattatatttactaaaggaactactgagggtataaactttatagctcaatcttgggct
tcttataatttaaaacctggtgatgaaattattatcagtaaacttgagcatcactctaat
attttaccttggattagattaatgcaagagaaagatatagtgcttaagtatataccaatt
actaataattttgagcttgattataaagcttatactaaattattatcaaataaaactaaa
ttagtctctattactagttgttctaatgcggttggatcaattactgatcttgattttatt
ataaaacatgcaaaagtatataatgcaaaagtattagttgatgctgctcaaactattgga
catagagattttaatcttaaaaacttaaatatagattttttagcattttcgggtcataag
attttgggtcctactgcaataggggttttatatatatctaaagatatgcaaaaagaagta
agaccttatcaattaggcggaggtatggtcttagatgttaatgactatgattttatttca
ttaaatcctcctaattgttatcaagcaggaactcctgctattgctcaagctataggtcta
tctcaagctataaaatatataagtgacaatatagattatgatttgctaaaaaaacatgaa
agtgctttatgtgcttatttgattcaagagttatctaagtttgatcatataaagatttta
ggtcctaaagaccaattatcaaattctggtcatattgttagttttgtctctactttatat
catcctcatgatattgctttttatttagatcaatttaacatagcagttcgagcaggtaat
cattgtgctcaacctctttttaagaatataggtattaatggttctgtaagagcaagcttt
tatatttacaatacatttgaagaagttgaaactttagtaaaagcacttaataagctcttt
agaaaataa
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