Candidatus Babela massiliensis: BABL1_gene_580
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Entry
BABL1_gene_580 CDS
T02948
Symbol
gyrA
Name
(GenBank) Type IIA topoisomerase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dpb
Candidatus Babela massiliensis
Brite
KEGG Orthology (KO) [BR:
dpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpb03032
]
BABL1_gene_580 (gyrA)
03400 DNA repair and recombination proteins [BR:
dpb03400
]
BABL1_gene_580 (gyrA)
Enzymes [BR:
dpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BABL1_gene_580 (gyrA)
DNA replication proteins [BR:
dpb03032
]
Prokaryotic type
DNA Topoisomerases
BABL1_gene_580 (gyrA)
DNA repair and recombination proteins [BR:
dpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BABL1_gene_580 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPD52
Motif
Other DBs
NCBI-ProteinID:
CDK30437
UniProt:
V6DFS2
LinkDB
All DBs
Position
complement(374062..376530)
Genome browser
AA seq
822 aa
AA seq
DB search
MEFTQEKGLYLRIAPVLIEEELKDSFLDYAMSVVVSRAIPDVRDGLKPVHRRILYTMNQL
GFHYNKPYHKSVRIVGEVLGKYHPHGDQAVYNTMVGMVQLFSKRYPLLDGQGNWGSVDGD
NAAAMRYTEVRMEKITQELLHDIDKNTVDFVPNFDESTVEPVILPSRLPNFIVNGTSGIA
VGMATSVPPHNLTEVINGCLALLKNENLSDEELFQLIPAPDFPTGGIICGKAGILKAYTT
GRGNLILRGVVDIEETKKGTALIIKELPYQVNKSELIIKIADLVKNKVIEGITNIRDESD
KSGIRVVIELKRNETPQVVLNLLYKHTSLQSSVGILMLALLDNRPIVFTLRQVLTEFLLH
RQNVITKRSQFALEKALSKEHILIGFGIALNNIDEVISLIKNSDNSDQAAAKLNSKFMLT
QEQCKAILEMRLQRLTGLEQEKINSELKDVQKEISYLRSLLSDKNLLKREIEEELLQIKD
NYSDERRTRIEGPVDNVTEADFIANDEVVVTLTKKGYIKRVELSVYNVQHRGGKGKMAMA
SLDDNDDVLQDMFVARNHDELLFFTNLGRIYNIPVYQVPEASRTAKGRAIVNLLPLNPNE
YVVKLLCTKDLDDKNLVMLTKKGIIKRTLAQEFGNIRSTGIRAITLNESDELVFCSLSSG
QDTIVIATAKGQGIRFKEEEVRAMGRQASGVIGIRLHEDDYVIGMEVLSDETQDILFATE
NGYGKRVKISDFRIAHRGGYGVRTIPTDKRNGQVIGLVVVGDNMDILLIDEHGKIIRLSS
KEIRTLGRQAKGVRLIKLDSGSKLAGAFAVVSSEKESQEVSE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggaatttacacaagaaaaagggctctatttgcgtattgctcctgtcttaatagaagaa
gaattaaaagattcttttcttgattatgcgatgtcggttgtagttagtagagctataccg
gatgtcagagatggcttaaagccagtacatagaagaattttatatacgatgaatcagtta
ggttttcattataataaaccttatcataaatctgttcgtatagttggggaagttttaggg
aaatatcatcctcatggtgatcaagctgtttataatactatggttggtatggttcagctt
ttttccaagcggtatcccctacttgatgggcaaggaaactggggatctgttgatggcgat
aatgctgcggctatgcgttatactgaagtacgtatggaaaagattactcaagagttactt
catgatatcgataaaaataccgttgactttgtgcccaattttgatgaatctactgtggag
cctgtaatacttccaagcagattgcctaatttcatagttaatggaacttcaggcattgcg
gttgggatggcaacatctgtaccacctcataatttaaccgaagtgattaatgggtgttta
gctttattgaaaaatgaaaatttatcagatgaggaactatttcagttaattcctgcgccg
gattttccaacaggcggtataatttgtggtaaagcgggtattcttaaggcttatacaaca
gggcgtggtaatttaatcttacgtggggttgttgatatagaggaaacaaaaaagggtact
gctttaattattaaagaactaccttatcaggttaacaaatcagagttaataataaaaatt
gccgatcttgttaaaaataaggtaatagaaggtattaccaatataagagatgaatctgat
aaaagtggtattagagttgttatagaactcaaaagaaatgaaactcctcaagtggtttta
aatttactctataaacatacttctttacagtcaagtgttggaattttaatgcttgctcta
cttgataacaggcctatagtgtttaccttacgtcaagtcttgaccgaatttttattgcat
agacaaaatgtaattacaaagcgtagccagtttgctcttgaaaaggctttatcaaaagaa
catatattaataggttttggaatagctcttaataatatagatgaggttatttctttaatt
aaaaattctgataattctgatcaagcagctgctaaattaaatagcaaatttatgcttact
caagaacaatgtaaagcaatattagaaatgcgtcttcaaagattaacaggtcttgaacaa
gagaaaattaatagtgaattgaaagatgttcagaaagaaatttcttatttaagatcttta
ttatctgataaaaatttactcaaacgagaaattgaagaagagctattacaaattaaagat
aattactctgatgaacgcagaactagaatcgaaggtcctgttgataatgttacagaagct
gattttattgccaatgatgaagtagtagttactcttaccaaaaagggttatatcaaacgt
gttgaattatctgtttataatgttcagcatagaggtggtaaaggtaaaatggctatggct
tctcttgatgataatgatgatgtattacaagatatgtttgttgcgcgaaatcatgatgaa
ctattgttctttactaatttaggccgtatatataatataccggtttatcaagttccagaa
gcttcaagaactgcaaaagggcgtgcaatagttaatttgcttccgcttaatcctaatgaa
tatgtagtaaaattattgtgtactaaagatcttgatgataaaaatttagttatgttaact
aaaaaaggcataattaaacgtactttagcacaagaatttggcaatattagaagtacaggt
ataagggctataactttaaatgaatctgatgaattagtattctgctctttaagttctggt
caagataccatagtaattgctacagctaaaggacaaggtataagatttaaagaggaagaa
gttagagcaatgggccgtcaagcatctggtgttataggcataaggcttcatgaagatgat
tatgttataggaatggaagttttaagtgatgaaactcaagatatattatttgcaacggaa
aatggctacggtaagcgtgttaaaattagtgattttagaatagctcatcgtggaggatac
ggtgtgagaactattcctacagataaacgtaatggtcaagttataggattagttgttgtt
ggcgataatatggatatcttattaatagatgagcatggtaaaatcatacgcttatcaagt
aaagagattagaacgttaggtcgtcaagcaaaaggtgtaaggttaattaaattagactca
ggatctaaattagcaggagcctttgccgtagtatcctcagaaaaagaatctcaagaagta
tctgaataa
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