Candidatus Babela massiliensis: BABL1_gene_690
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Entry
BABL1_gene_690 CDS
T02948
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III gamma/tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dpb
Candidatus Babela massiliensis
Pathway
dpb03030
DNA replication
dpb03430
Mismatch repair
dpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BABL1_gene_690 (dnaX_1)
03430 Mismatch repair
BABL1_gene_690 (dnaX_1)
03440 Homologous recombination
BABL1_gene_690 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpb03032
]
BABL1_gene_690 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
dpb03400
]
BABL1_gene_690 (dnaX_1)
Enzymes [BR:
dpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BABL1_gene_690 (dnaX_1)
DNA replication proteins [BR:
dpb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BABL1_gene_690 (dnaX_1)
DNA repair and recombination proteins [BR:
dpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BABL1_gene_690 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
AAA_5
RCF1-5-like_lid
AAA_22
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_16
AAA_14
AAA_assoc_2
TIP49_C
AAA_18
Thymidylate_kin
AAA_19
Zeta_toxin
NACHT
TsaE
DnaX_C
Motif
Other DBs
NCBI-ProteinID:
CDK30328
UniProt:
V6DHA6
LinkDB
All DBs
Position
252445..254112
Genome browser
AA seq
555 aa
AA seq
DB search
MNIQLNLARKWRSKRFDDVVGQELVIRLIKNSLYRNLVFPVYLLSGPKGSGKTTTARLFA
SALNCNELSNFEKKPQEVSLPCNQCNSCISMSKFAHPDFIEIDAASNTGVENIRQIIETA
SFMPVLGKKKIYLIDEAHMLSKAAFNAFLKILEEPPTGTVFMLATTDVNKIISTVQSRCF
QLFFSIIQDQDIVNHLSFICTEENISFDIEALNLIANQSQGSLRDAINLLEKVRLNSEKV
DKESILETLGFLNENNLFEILNTVLNKNIVELINLFNKINLKNYNVIIIWKQFIELVHQL
FLIKNQIDTSIKLNKNIDLIINKISIKILLDMLEIAHSYEFKLSKTTLPYLNLELMFINL
AQKINLDKNNNLDKEKFTQVININNNTDNKLDINQDKWKKVLVEIDSLKDPLLNSIFQQA
ELDLSNYLNKELILLFSKDFVFFKDILEETKKTWITIFNKNFGIDVSIKFNFNKIINNTS
ITLNNKNNNQNEEIAEKKSIYPKKETILIKNSIINNKKEYKTKSLDISNQSKWPRANTIL
KIFPGKIYLEENTSL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacagctaaatctagctcgaaaatggcgctctaaaagatttgacgacgttgtt
gggcaagagctagttattcgacttataaaaaatagtctatatcgaaacttagtatttcct
gtttatttattatcaggacctaaaggttctggaaaaactacaacagcgcgtttgtttgcc
tcagctttaaattgcaatgaattaagtaactttgaaaaaaaaccacaagaagtttcttta
ccttgcaaccaatgtaattcctgtatctctatgagcaaatttgctcatcctgattttata
gaaatagatgcagcttcaaacacaggggtagaaaacataaggcaaataatagaaactgcc
tcatttatgccagttcttggaaagaaaaaaatatatttaatcgatgaagctcatatgtta
agtaaagctgcttttaacgcttttcttaaaatacttgaagaacctccaactggtacggtt
tttatgttagcaacaacagatgttaacaaaattatttctacggtacaatcaagatgtttt
cagctttttttctctattattcaagatcaagatatagtcaatcatttaagttttatatgt
actgaagaaaatatctcttttgatatagaagcactaaatctaatagcaaatcaatcgcaa
ggatctttaagagatgccataaatttacttgaaaaagtaaggttaaatagtgaaaaagtt
gataaagaaagtatacttgaaactctaggatttttaaacgaaaacaatttatttgagata
ttaaatactgttcttaacaagaatatagttgaacttataaatttatttaacaaaataaat
ctcaaaaattataatgtcataattatttggaagcaatttatagaattggttcatcaacta
tttttaataaaaaatcaaatagatactagtataaagctaaataaaaatatagatttaatc
attaataaaatatcaataaaaatacttttagatatgcttgaaatagcacattcctacgaa
tttaagttatctaaaacaactttaccttatttaaatcttgaattgatgtttataaattta
gctcagaaaattaatttagataaaaataacaatcttgataaagaaaaatttactcaagta
attaatataaataataacactgataataaattagatattaatcaagataaatggaaaaag
gtattagtagaaatagatagcctaaaagatcctcttttaaattcaatatttcaacaagca
gagttagatttatcaaactatttaaataaagaattaattttattatttagtaaagatttc
gtattttttaaagacatccttgaagaaactaaaaaaacttggattactatatttaataaa
aattttggtatagatgtcagtattaagtttaattttaacaaaataattaataatacaagc
attactttaaacaacaaaaacaataaccaaaatgaagaaattgctgaaaaaaaaagcatt
tatcctaaaaaagagacaattttaattaaaaatagtataattaataataaaaaagaatat
aaaacaaaaagtttagacatatctaatcaatccaaatggcctagagcaaatactatatta
aaaatttttccaggcaaaatttatttggaagaaaacactagtctttag
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