Candidatus Babela massiliensis: BABL1_gene_713
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Entry
BABL1_gene_713 CDS
T02948
Symbol
mutS_2
Name
(GenBank) Mismatch repair ATPase (MutS family)
KO
K03555
DNA mismatch repair protein MutS
Organism
dpb
Candidatus Babela massiliensis
Pathway
dpb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BABL1_gene_713 (mutS_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpb03400
]
BABL1_gene_713 (mutS_2)
DNA repair and recombination proteins [BR:
dpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BABL1_gene_713 (mutS_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
COG5_N
nSTAND_NTPase5
AAA_14
Motif
Other DBs
NCBI-ProteinID:
CDK31002
UniProt:
V6DHE5
LinkDB
All DBs
Position
complement(1013850..1016318)
Genome browser
AA seq
822 aa
AA seq
DB search
MDSNKNKNNLTPLMKQYYDIKNEHPDTLLLFQVGDFYELFFEDAIKASSNLGLALTHRGT
DANGHPIPLCGVPTHVLDHYLIKLVKAGFKVAVCDQLETPKAGKIVKRGITQVLTPGTLT
DLKLLDEKSASYLCTFFPTIENNILIFAELLTGQLFITSIEDNTSKSIESEILRFMPDEI
VIPDTKEAKKYISTFKQFSNVTVESFDILTNNFDTKTTILQESKIWFKEQFDQENNNIDN
LKNTDAFNYGLATFYKFLKRNNEKALNQIKTLSIYNQEDFLILDAATQKNLELIKNSKDG
SSKNTLFSVLDQAVTPMGSRTIKKWITRPLIKKDLIEKRLDSVEFLTQNIIFKENIIKYI
QKIGDIERTIGRIALSRAQLHDYILLAQALEFVPLIKQELSTHAIDNKLLSAIGSKISDF
SQIHNLLLDSINTDTTTQRLIKKGFNQEIDRLRNLIEHGAQEIFKLEKKEQERTGINSLK
IRYNGAYGYSIEVTKANLNSIPNDYIRTQTLTNKERFTTQELKDLEYDISRANNDIEEIE
KEVFAQIKREVEKYLNHLKKLSYSLSYLDALISLSQVAYNNNYSRPEFNGQKEIVIENGR
HPVIEFNLKEKFIPNSTTLNQEQTLWIITGPNMGGKSTYLRQVALVCIMAQIGSFVPAKN
ANLFILDRVFTRIGASDNLSEGKSTFLVEMEETALICNQATENSLVILDEVGRGTSTFDG
LAIAQAVIEHIYNNIKARCLFATHYHELTELNKKFKDIVLYHAASTKSEGSIVLLHKILP
GIAESSFGLEVAKLAQLPKGLINRAQEILDNLNNKNIKDNIY
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaacaaaaataaaaataatctcacgccattaatgaaacagtattacgatata
aaaaatgaacatccagatacattattactttttcaagtgggtgatttttatgaattattc
tttgaagatgcaatcaaagcttcatccaatctagggctggcattaactcatagaggaaca
gacgctaatggccaccctataccactttgtggtgttcctacacatgttttagatcattac
ttgattaaattagtaaaggcaggatttaaagttgctgtatgcgatcaactggaaacacca
aaagcaggaaaaatagtaaaacgtggaataacacaggttcttactcctggaactttaact
gatttaaaacttttagacgaaaaatcagcttcttatctttgtacgttttttcctacaatc
gaaaataatatattaatatttgcagaacttttaacgggacaactatttataacatctatt
gaagataacacatctaaatctatagaatctgagatactaagatttatgcctgacgaaatc
gtaattcctgatactaaagaagcaaaaaagtatatttctacctttaaacaatttagtaat
gtaacagttgaaagtttcgatatacttacaaataattttgatacaaaaactactatactt
caagaatctaaaatttggttcaaagaacaatttgatcaagaaaataataatatagataat
ctaaaaaacactgatgctttcaattatgggctagcaactttttataaatttctcaaaaga
aataacgaaaaagcattaaatcaaataaagactctatctatttataatcaagaagatttt
ttaatattagatgcagcaactcaaaagaacttagaacttattaaaaattctaaagacgga
agttcaaaaaacactctattttcagtacttgatcaagctgttacccctatgggttcaaga
actattaaaaagtggataacacgaccattaataaagaaagatttaatagaaaaaagatta
gattcagtagaatttttaactcaaaatataatttttaaagaaaatataataaaatatatt
caaaaaataggcgatatagaaagaactattggacgcattgctttatcgcgagcccaatta
catgactatatcttattagctcaagccctggaatttgtaccgttaataaaacaagaatta
tcaactcatgccattgataataaattattaagtgcaataggatctaaaattagtgacttt
tctcaaattcataatttattactagattctataaataccgatactactactcaacgttta
ataaaaaagggttttaatcaagaaatagatcgcttgagaaatttaatagagcatggtgcc
caagagatttttaagcttgagaaaaaagaacaggaaagaaccggtattaattctctaaaa
attagatataatggcgcttacggctatagtatagaagtaacaaaagccaatcttaattct
attcctaatgattatataagaactcaaactttaaccaataaagaacgttttactactcaa
gaattaaaagatcttgaatatgatataagtagagcaaataatgatattgaagaaattgaa
aaagaagtttttgcacaaatcaagcgtgaagttgaaaagtacttaaatcacttaaaaaag
ttatcttattctttatcttatctagatgctttaatttctttatctcaagttgcttataat
aacaattattcaagaccagaatttaatggccaaaaagagattgttatagaaaatggaaga
catccagtaattgagtttaacttaaaagaaaaattcataccaaactcaactacacttaat
caagagcaaactctatggattattacaggacctaatatgggtggaaaatcgacttattta
cgtcaagtagctttagtttgcattatggctcaaataggttcatttgttcctgccaaaaat
gctaatttatttattttagatagagtttttacacgtattggtgcgtctgataatttaagt
gaaggtaaaagtactttcttagttgaaatggaagagactgcactaatttgtaatcaagct
actgaaaacagtttagtaattttagatgaagtaggacgggggacaagcacttttgatggt
cttgctattgctcaagcagtaattgagcatatttataataatataaaagcaagatgtcta
tttgctacacattatcatgaacttacagagcttaataagaaatttaaagatatagtactt
tatcatgctgctagcactaagtcagaaggcagcatagttttacttcataaaattttaccc
ggtatcgctgaatcgagttttggtttagaggtagctaaattggcacagttacctaaaggt
ttaattaacagagctcaagagattttagataatttaaataataagaatattaaagataat
atatattaa
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