Candidatus Babela massiliensis: BABL1_gene_723
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Entry
BABL1_gene_723 CDS
T02948
Symbol
sbcC
Name
(GenBank) ATPase involved in DNA repair SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dpb
Candidatus Babela massiliensis
Brite
KEGG Orthology (KO) [BR:
dpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpb03400
]
BABL1_gene_723 (sbcC)
DNA repair and recombination proteins [BR:
dpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BABL1_gene_723 (sbcC)
Archaeal homologous recombinant proteins
BABL1_gene_723 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
Rad50_zn_hook
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CDK31012
UniProt:
V6DHE8
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All DBs
Position
1027197..1029929
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AA seq
910 aa
AA seq
DB search
MIPLKLQIKNFVSYGPKTQTIDFGAYNLICLSGKNGHGKSALLDALTWSIWGQARKISGS
SRSDEALLHLGQTSMMVVLDFLCMSVQYRIRREFTQLSGKKSCSSLEFGIIDNQSGIFKP
LTEKTIRDTQSKIEKIVGLDYDSFINSAFLRQGQSNEFSKKSPGDRKEVLANILGLNRFE
NIKKLALQRTRDSINIRDYSIQICTQLEKELASKIIIKDQLSQIINDIENLSQEEHILKD
RLKDIKKAQESIITLKSKAQQIYFEKEQLATSIKVKTEDILKDFNKWRTVFRKSKNFQNI
EQIDQIYNRLVLELKDLQIIIRERVNVKEQLFTKKEKFYQYVQNITQEFNTKLDNKKLEL
KHNQISLKNLEEKLEELEKTYSEDLCQLQKLNQELNLLISQNFSYDEIKNINDNIEKELY
IFDRRKSYYSKFEAQIFWNQNQLKDLESKIVLIEKDSQASCPLCLQNLNSDYKDNLNINL
EQDKLFLNNRLNKLKHLTSKLRDILTQQNDKIIKLKYEIERYNIFQVKKESTEKDIEKLN
ELIKHKDNEIIRYRNLIANQKMTLDKVIQDIKLNESQFESTVLNDITYKSLKSEIDNLDS
YLNSINIDEQKEVYLIAEIHKLEEIKKEQAYFLSEFALQQDRQDKIGHLIAEVKELKKFK
KEKESQYQELNFVFEKELLLQNQEYLIDQKLQEISLKKEKLILQQGSIAEQDKILDQKNK
EYNDQKCNLDTLSREIEDYKAISTALGKDGIQALLIEDAIPEIENEANILLGRMTDNQSH
IIIESLKDLKSGGTKETLDIKISDPLGLRPYELFSGGEAFKIDFALRIAISKLLARRAGA
SLQTLIIDEGFGSQDEEGLAHIMNIIYKIQEDFEKIIVVSHLNSMKEQFPVHFLVHKTPQ
GSLIKVVEQG
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgattcctttaaaattacagatcaaaaattttgttagctatggccctaaaactcaaact
atcgattttggtgcatacaatttgatttgtttatcaggtaaaaacggacatggtaagtct
gcattacttgatgcgcttacatggtctatctggggacaagcacgtaagataagtggttcc
tcgcgatctgatgaagctttattgcatttaggtcaaacttctatgatggtagtattggat
tttttatgtatgtcagtccagtatagaattagaagagaatttacgcaattatcaggcaaa
aaatcatgctctagtttggagtttggtattatagataatcaaagcggaatatttaaacct
cttacagaaaaaactataagagatacgcagtcaaaaatagaaaaaatagtaggacttgat
tatgattcttttataaattctgcttttttacgacaaggacaatctaatgaattttctaaa
aaatctccaggagatcgtaaagaagttttagcaaatattttggggcttaatcgttttgaa
aacattaaaaaattagcacttcaaagaactagagattctataaatattcgagattatagt
attcaaatttgtactcaacttgaaaaagaattagcatctaaaataattattaaagatcag
ttaagtcagataattaatgatattgaaaatctatctcaagaagaacatattttgaaagat
agattaaaagatataaaaaaagctcaagaatctattataactttaaaatctaaagctcaa
cagatatattttgaaaaggaacaattagcaacttctataaaagttaagacagaagatata
ttaaaagattttaataaatggcgtaccgtttttaggaaaagtaaaaattttcaaaatata
gaacaaatagatcagatttataatagattggttttagaattaaaagatcttcaaataatt
ataagagaaagagtaaacgttaaagagcaattgtttacaaaaaaagagaagttctatcaa
tatgtacaaaatattactcaagagtttaacactaaattagataacaagaaattagaactc
aaacataatcaaattagcttaaaaaatttagaagaaaaattagaagagctagaaaaaact
tattcagaagatttatgtcaacttcagaaattaaatcaagaattgaatttattaatttca
caaaatttttcttatgacgaaattaaaaatataaatgataatattgaaaaagagttatat
attttcgatcgacgaaagtcttactatagtaaatttgaagcacaaattttttggaatcaa
aatcaattaaaagatcttgagagcaaaatagttttaatagaaaaagattctcaagcatct
tgtccactttgtcttcaaaatttaaattctgattataaagataatttaaatattaatctt
gaacaagataaattgtttttaaataatagattaaataagctaaaacatttaacttctaaa
ttaagagatattttaactcaacaaaatgataaaattataaaattaaaatatgaaattgag
agatataatatttttcaggtcaaaaaagaaagtactgaaaaagatatagaaaaattaaat
gaattaataaagcataaagataatgagattataagatacagaaatttaatagcaaatcaa
aaaatgactttagataaggttattcaagatattaaattaaatgaatctcaatttgagagt
actgttttaaatgatataacatataaatctttaaaatcagaaattgataatttagattct
tatttaaattcaattaatatcgatgagcaaaaagaagtttatttaatcgctgagatacat
aagctagaagaaataaagaaagaacaagcttatttcttatctgagtttgctttacagcaa
gataggcaagataaaattgggcatttaatagctgaagttaaagaactaaaaaaatttaaa
aaagaaaaagaatctcaatatcaagagttgaattttgtttttgaaaaagagttacttttg
caaaatcaggaatatttaattgatcaaaaattacaggaaatatcgttaaaaaaagagaag
cttattctacaacaaggttctattgctgagcaagataagatcctagatcaaaaaaataaa
gaatataatgatcaaaaatgtaatttagatactctatctagagaaattgaggattacaaa
gctatatcgacggctttaggtaaagatggaatacaagcacttttaatcgaagatgcaata
ccagaaatagaaaatgaagcgaatattcttttaggtcgtatgactgataatcaatctcat
attataatagagtctttaaaagatcttaaaagcggtggcactaaagaaactttagatatc
aaaatctctgatcctttaggcttgaggccctatgagttgttttctggtggagaagctttt
aaaattgattttgctttacgtattgcaatttctaaacttcttgctcgaagagctggagct
tctttacaaactttgataatcgatgagggttttggatctcaagatgaagaaggattagct
catatcatgaatattatctataaaattcaagaagattttgagaaaattatagttgtatct
catttaaattcaatgaaagaacaatttccagttcattttctagtacacaaaacacctcag
ggtagtttgattaaagttgtcgaacagggctag
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