Candidatus Babela massiliensis: BABL1_gene_849
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Entry
BABL1_gene_849 CDS
T02948
Symbol
truB
Name
(GenBank) Pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dpb
Candidatus Babela massiliensis
Brite
KEGG Orthology (KO) [BR:
dpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpb03016
]
BABL1_gene_849 (truB)
Enzymes [BR:
dpb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BABL1_gene_849 (truB)
Transfer RNA biogenesis [BR:
dpb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BABL1_gene_849 (truB)
Prokaryotic type
BABL1_gene_849 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
CDK30155
UniProt:
V6DF02
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All DBs
Position
43687..44394
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AA seq
235 aa
AA seq
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MSNLSGFILINKPKDITSFQVIRYLKKFLPKNTKIGHAGTLDPFATGLMIIAISREYTKK
ISMFLNSDKEYIATAQLGILTDTLDLTGSIIKECDHAITQDSIQNSIEELKDNYVQIPPI
YSALKYQGKALYKLARNKKLSEQDLNKISQNKKREVKIYSIDILEFNDPYLKIKTQVSHG
TYIRSLVNDIAQMAGTVATTQELMRTKIDNYSLDQALELEKIKDAEMIEKNLLKI
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacttatcaggattcatacttattaataaacctaaggacataacatcttttcaa
gttataagatatcttaaaaaatttttacctaaaaatactaaaataggtcatgcggggact
ttagacccttttgccacaggtttgatgataatagcaatatcaagagaatatacaaaaaaa
attagtatgtttctcaattcagataaagagtatatagcaactgctcaattaggaatatta
acagatacattagatcttactggctcaattataaaagaatgtgatcatgcgattactcaa
gattctattcaaaattctattgaagagttaaaagataattatgtacaaatccctcctatt
tattctgctcttaaatatcagggaaaagctttatataaattagcaagaaataaaaaatta
tcagagcaagatctaaataaaatatctcaaaataaaaaacgtgaggtaaaaatatatagt
atagatatattagagtttaatgatccttatttaaaaatcaaaactcaagtctctcatgga
acttatattagatctcttgtaaatgatattgcacaaatggctggtactgtagcaactact
caagaattaatgagaactaaaatagataactattctcttgatcaggcacttgagcttgaa
aaaatcaaagatgcagaaatgatagagaaaaatttgttaaaaatttag
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