Dietzia psychralcaliphila: A6048_02495
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Entry
A6048_02495 CDS
T05437
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dpc
Dietzia psychralcaliphila
Brite
KEGG Orthology (KO) [BR:
dpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpc03032
]
A6048_02495
03400 DNA repair and recombination proteins [BR:
dpc03400
]
A6048_02495
Enzymes [BR:
dpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A6048_02495
DNA replication proteins [BR:
dpc03032
]
Prokaryotic type
DNA Topoisomerases
A6048_02495
DNA repair and recombination proteins [BR:
dpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A6048_02495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Rep_1B
RRF
NatA_aux_su
Motif
Other DBs
NCBI-ProteinID:
AWH94560
UniProt:
A0AAD0JRI0
LinkDB
All DBs
Position
574818..577793
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AA seq
991 aa
AA seq
DB search
MASKQTASGGKRSLVIVESATKARKIQPYLGSDYVVEASVGHIRDLPKGAADIPAKYKKE
PWARLGVNPEDNFEPIYVVSADKKKKVAELKKELAGVDQLLLATDPDREGEAIAWHLLEV
LKPKVPVKRMVFHEITKPAILAAAENTRELDTDLVDAQETRRILDRLYGYEVSPVLWKKV
MPRLSAGRVQSVATRVIVERERERMAFVAADYWDITATLTTQQATGGDAGEPRSFTARLA
AVDGARVAQGRDFGQNGQLKTTGAAKDSVVLGETAARALSDALDGADFVVDSVESKPYTR
RPYPPFMTSTLQQEAGRKLRYTSERTMRIAQRLYENGYITYMRTDSTTLSEGGMSAARAQ
ATELYGSEYVSPTPRQYTRKVKNSQEAHEAIRPAGETFATPGQLHSALDAEEFRLYELIW
QRTVASQMADAKGTSVSIRISGAAGQNPSGYSRATFAASGRTITFPGFLKAYVEAAEEST
ESSDKPMADDAERRLPRLNEGQQLTGSDLSADGHTTSPPARYNEASLVKIMEEMGIGRPS
TYASIIRTIQDRGYVYSRGNALVPSWVAFAVIGLLEQNFGRLVDYDFTSLMEDELDEIAE
GRENRDDWLRRFYFGDPEGGGSSGGADRAVGLKNLIDVNLEAIDARSINSIRVFDDTEGR
PVHVRVGRYGPYLERMVQGEDGEQESQRANLPEGMSPDELTLEVAEKLFSTPQDGRPLGV
DPETGHEIVVKDGRFGPYVTEKLPEPTDAEKAEWAKKVLADAEAEKKKIDAERDAAMAAA
KDDEAKAEAKKAATKAKSAVTRKAKKESDNPTGPKPRTGSLMQSMEPATVTLEEALKLLS
LPRVLGVDPTSGEEITAQLGRYGPYLRKGTDSRTLDTEDAVFTITLEEALKIYSEPKRRG
RQAAAPKALREMGVDEVSGKQMLVKDGRFGPYVTDGESNASLRKGDTVETLTDARASELL
SERRAKSPPKKAAAKKAPARKSPAKKAAAGR
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
gtggcgagcaagcagacagcatcgggcggaaagcggagcctggtgatcgtcgagtccgcc
accaaggcccgcaagatccagccctacctgggctccgactacgtggtcgaggcgtcggtc
ggccacatccgtgacctgcccaagggcgccgcggacatccctgcgaagtacaagaaggaa
ccgtgggcacggctcggcgtgaacccggaggacaacttcgagccgatctacgtggtgagc
gcggacaagaagaagaaggtcgccgagctcaagaaggaactggcgggcgtggaccagctc
ctgctggccaccgaccccgaccgcgagggcgaggcgatcgcctggcacctgctcgaggtg
ctcaagcccaaggtccccgtcaagcgcatggtgttccacgagatcaccaaaccggcgatc
ctcgccgcggccgagaacacccgcgagctggacaccgacctcgtcgacgcccaggagacc
cgacggatcctggaccgtctctacggctacgaggtctcaccggtcctgtggaagaaggtc
atgccgcggctctccgccgggcgtgtgcagtccgtggccacccgcgtgatcgtcgagcgc
gagcgcgagcgcatggcgttcgtcgccgccgactactgggacatcaccgcgaccctgacc
acgcagcaggcgaccggcggggatgcgggcgaaccgcgcagcttcacggcccgcctcgcg
gcggtggacggggcccgggtggcgcagggtcgcgacttcggccagaacggccagctcaag
accaccggcgccgccaaggactcggtggtgctcggcgagacggcggcccgcgcgttgtcg
gacgcactcgacggcgccgacttcgtcgtcgactcggtggagtccaagccgtacacccgt
cgcccctacccgccgttcatgacctcgacgctgcagcaggaggcaggccgcaagctgcgc
tacacctccgaacgcaccatgcgcatcgcgcagcggttgtacgagaacggctacatcacc
tacatgcgtaccgactccacgacgctgtccgaggggggaatgtcggccgcccgcgcgcag
gccacggagttgtacgggagcgagtacgtctcgcccaccccgcgccagtacacccgcaag
gtcaagaactcgcaggaggcacacgaggccatccgcccggccggagagaccttcgccacc
ccgggtcagctgcatagcgcactggacgccgaggagttccgcctgtacgagctcatctgg
cagcgcaccgtcgcctcccagatggccgacgccaagggcacctcggtgagcatccggatc
tcgggggccgcgggccagaacccgtccgggtacagccgtgcgacgttcgccgcctcggga
cgcaccatcacgttccccggattcctcaaggcgtacgtcgaggcggcggaggagtccacc
gagtcgtccgacaagcccatggcggacgacgccgagcgacggctaccccggctcaacgag
ggccagcagctcacggggtcggacctgtccgccgacggccacaccaccagcccgccggcc
cgctacaacgaggccagcttggtcaagatcatggaggagatgggcatcggccgcccctcc
acctatgccagcatcatccgcaccatccaggaccgcggatacgtctactcccgcggtaac
gcactcgtgcccagctgggtggccttcgccgtgatcggtctgctcgagcagaacttcggc
cgactggtggactacgacttcacctcactcatggaggacgagctcgacgagatcgccgag
gggcgcgagaaccgcgacgactggctgcgtcgcttctacttcggcgaccccgagggcggc
gggtcgagcgggggagcggaccgcgcggtcgggctcaagaacctcatcgacgtgaatctc
gaggcaatcgacgcccgcagtatcaactccatccgggtcttcgacgacaccgaggggcga
ccggtccacgtccgcgtcggccgctacggcccgtacctcgagcgcatggtccaaggggag
gacggtgagcaggagtcgcagcgcgccaacctgcccgaggggatgagccccgacgagctc
accctcgaggtggcggagaagctcttctcgactccgcaggacggccgcccgctgggcgtg
gacccggagaccggtcacgagatcgtggtcaaggacggccggttcggcccctacgtcacc
gagaagctgcccgagcccacggacgccgagaaggccgagtgggccaagaaggtgctcgcc
gacgccgaggcggagaagaagaagatcgacgccgagcgcgacgccgccatggcggccgcg
aaggacgacgaggccaaggcggaggccaagaaggccgcgaccaaggccaagtccgccgtc
acccgcaaggccaagaaggaatccgacaacccgaccggccccaagccgcggaccgggtcg
ctgatgcagtccatggaaccggccacggtcacgctggaggaggcgctcaagctgctgtcg
ctgccgcgggtgctgggggtcgaccccacgagcggtgaggagatcacggcgcagctcggc
cgctacgggccctacctgaggaagggcaccgattcgcggaccctggacacagaggacgcc
gtcttcaccatcacgctcgaggaggctctgaagatctattccgagcccaagcgtcgcggg
cggcaggccgctgctcccaaggcgctgcgcgagatgggggtcgacgaggtctccggtaag
cagatgctggtcaaggacgggcgcttcggcccctatgtgaccgacggggagtcgaacgcg
tcactgcgcaagggcgacacggtcgagacgctcactgacgcgcgcgcctcggagttgctc
tcggagcgacgcgccaagtcgccaccgaagaaggccgccgcgaagaaggcgccggcccgg
aagtcaccggccaagaaggccgccgcgggccgctga
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