Dietzia psychralcaliphila: A6048_03960
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Entry
A6048_03960 CDS
T05437
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
dpc
Dietzia psychralcaliphila
Pathway
dpc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A6048_03960
09124 Replication and repair
03420 Nucleotide excision repair
A6048_03960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpc03021
]
A6048_03960
03400 DNA repair and recombination proteins [BR:
dpc03400
]
A6048_03960
Enzymes [BR:
dpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6048_03960
Transcription machinery [BR:
dpc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
A6048_03960
DNA repair and recombination proteins [BR:
dpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
A6048_03960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
DUF7108
Motif
Other DBs
NCBI-ProteinID:
AWH94791
UniProt:
A0AAD0JS39
LinkDB
All DBs
Position
complement(899514..901181)
Genome browser
AA seq
555 aa
AA seq
DB search
MSGGPLIVQSDKTVLLEIDHDQANDARQALAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDVLVNYSRFPVPQPLLVDIADTMARYGRLQLVKSPVHGLTLISLDAAVLAEVR
RHKKIAPMLGAEIDADTVIVHASERGRLKQELLKVGWPAEDLAGYVDGEAHEISLSTESE
PWELRDYQQMAADSFWAGGSGVVVLPCGAGKTMVGAAAMARAKATTLILVTNTVAGRQWK
RELLARTTLTEDEIGEYSGERKEIRPVTIATYQVVTRKTKGVHRALELFDSRDWGLMIYD
EVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWI
APADCVEVRVTLTENERMLYATAEAEDKYKLCSTARTKIPVVKKILATHAGAPTLVIGAY
LDQLEELGIELDAPVIQGSTSNKEREKLFNAFRAGEISTLVVSKVANFSIDLPEASVAVQ
VSGTFGSRQEEAQRLGRLLRPKKDGGQAHFYSVVSRDTLDAEYAAHRQRFLAEQGYAYRI
IDADDLLGPELPEVG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtgagtggtggaccgctgatcgtccagtcggacaagaccgtattgctggagatcgaccac
gatcaggcgaacgacgcccggcaggccctggccccgttcgccgagctcgaacgcgctccc
gagcacgtccacacctaccggatcaccccgctcgccctgtggaacgcgcgggccgccggt
cacgacgccgagcaggtcgtcgatgtgctggtcaactactcgcgcttccccgtcccccag
ccgctcctggtcgacatcgccgacacgatggcccgctacgggcgactccagctggtcaag
agcccggtccacggcctgaccctgatctcgctcgacgccgccgtgctcgccgaggtcagg
cgccacaagaagatcgctccgatgctcggggccgagatcgacgccgacaccgtcatcgtc
cacgcatccgagcgcggccggctcaagcaggaattgctgaaggtggggtggccggccgag
gacctggcggggtacgtcgacggcgaggcccacgagatctccctctccaccgagtccgag
ccctgggagctccgcgactaccagcagatggccgcggactccttctgggccggcgggtcc
ggcgtggtcgtgctgccctgcggggccggcaagaccatggtcggcgcggccgcgatggcc
cgcgccaaggccaccacgctcatcctcgtgaccaacaccgtcgccgggcggcagtggaag
cgcgagctgctggcccgcacgacactcacggaggacgagatcggtgagtactcgggcgag
cgcaaggagatccgtccggtcaccatcgccacctaccaggtcgtcacgcgcaagaccaag
ggtgtgcaccgggcgctggagctgttcgactcccgagactggggcctgatgatctacgac
gaggtgcacctgctcccggcaccggtcttccggatgaccgcggacctgcagtcgcgccgc
cgtctcgggctcaccgcgacgctggtccgcgaggacggccgggagggcgatgtcttctcg
ctgatcggcccaaagcgctacgacgccccctggaaggacatcgaggcgcagggctggatc
gcccctgcggactgtgtggaggtccgcgtgacgctgaccgagaacgagcggatgctctac
gccaccgccgaggcggaggacaagtacaagttgtgctcgaccgcccgcaccaagatcccg
gtggtcaagaagatcctcgccacgcacgccggcgcaccgaccctggtcatcggcgcctac
ctcgaccagctcgaggaactggggatcgagctcgacgcgcccgtgatccagggatcgacc
tccaacaaggagagggagaagctgttcaacgccttccgcgccggggagatctccacgctc
gtggtgtccaaggtcgccaacttctccatcgacctgcccgaggccagcgtcgccgtgcag
gtctccggcaccttcggctcccgccaggaggaggcccagcggctaggacggctactgcgg
cccaagaaggacggcgggcaggcgcacttctactcggtcgtctcccgggacaccctcgac
gccgagtacgccgcccaccgccagcgcttcctcgccgagcagggttacgcctaccggatc
atcgacgccgacgacctactcggcccggaactccccgaggtcggctga
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