Dietzia psychralcaliphila: A6048_04805
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Entry
A6048_04805 CDS
T05437
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dpc
Dietzia psychralcaliphila
Pathway
dpc03420
Nucleotide excision repair
dpc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6048_04805
03430 Mismatch repair
A6048_04805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpc03400
]
A6048_04805
Enzymes [BR:
dpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6048_04805
DNA repair and recombination proteins [BR:
dpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6048_04805
MMR (mismatch excision repair)
Other MMR factors
A6048_04805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AWH94920
UniProt:
A0AAD0JSC3
LinkDB
All DBs
Position
1080951..1084277
Genome browser
AA seq
1108 aa
AA seq
DB search
MTPATSPDGIADALGVHRPTPEQAAVIAGPAEPTLVLAGAGAGKTETMAARVVWLVANGH
ARPSEILGLTFTRKAAQQLSRRIRRRLEALAGSPLCTGPGADPRIAESIRTEDPQISTYH
AFAGTLLGSYGLLVPVEPDSRLLTPTAAFQLAHDVVSRWESPLATGSSAAQVTRDVLALA
GQLSEHLVSTDDLRAHPDLLSTLVATLPGGPGQRAAPTKWLDEAATVQGHRDELADLVDA
VAARMREESALDHSSQMALAATVARDHPQVGEAERRAFRVVLLDEYQDTGHSQRVLLTSL
FGGGAGPVPAVTAVGDPMQSIYGWRGASASNLDRFRDDFPRPGGQQSHLRELTTSWRNPP
EVLALANRITLPLRDRPGSVPVPQLRARPGAGRADLRMAVLDTAEAERDWLADSMASRYH
AAVSAGRVPTAAVLVRRNSDSGPIAEALEKRGLPVEVVGVGGLLDVPEVADVVSLLTVVA
RPGAGAPLVRLLSGSRFALGAADLAALARRASALSLRRPVDAGGALSRVEELEDVLDAIA
RGEETDAAGLADALADPGPEGDYSPAGVARIAELSRIIAALRARSSALPTRLVAAAEQAL
GLDAEVRLRERAGGGEAREQLDELQEVAAGFRADRGSGLDALLAHLDLARTVDGGLARGE
VAATPGRVQILTVHSAKGLEWEMVAVPHLSVGVFPSDRAPQTSVRSATHLPEELRGDRES
GDNPGGVPVPRLDDVADRKLLEAALRGHIDRVARRSLDEDRRLFYVAVTRAEHSLLLSAS
HWHGSGSTPRGPSEFLDEALRSCGGPEPLGEIDHLVVTPSATNPATSSVVEATWPRAAAS
DRRSAAHAVETADPVDPEADPAPDHGAARHWHLVAAPLLADARRAAERRDAVVLPRRLTA
GEVVAMATDPDAFADRLRRPVPFRPDRFARRGTRFHLWLEHRFGATHLLDIDDLPGAGDQ
GAVDGLSEADLAALQHAFETSRWARLTPEAVEVPFEVGLGEHLLRGRMDAVFADGDDWIV
VDWKTGRVPGAGELPSVSLQLAVYRYAWAKVVSARLGQPIELGRVRAAFHYVRDGRTVEP
TDLPDADELLRLLSAGPGRGRLLSDGDR
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccggcgacgagccccgacggcatcgccgacgcgctcggtgtccaccgtccgacc
ccggagcaggcggcggtgatcgccggccccgccgagccgaccctcgtgttggccggcgcg
ggtgcgggcaagaccgagaccatggccgcgcgcgtggtgtggctcgtggccaacggccat
gcccgcccgtcggagatcctcgggctcaccttcacgcgcaaggccgcccagcagttgtcc
aggagaatccggcgacggctcgaggcgctggccgggagcccgttgtgcaccggtccggga
gcggacccccggatcgcggagtcgatccgcaccgaggatccgcagatctcgacctaccac
gcgttcgcgggcactctgctcgggtcctacggactgctcgtcccggtcgaaccggattcg
cggctgctcaccccgacggctgcgttccagctcgcgcacgacgtcgtctcgcggtgggag
tccccgctcgccacggggtcctccgccgcacaggtgacccgcgatgtcctggccttggcg
ggtcaactctccgagcacctcgtgtccactgatgacctgcgggcccaccccgatctcctc
tccaccctcgtcgcgaccctgcccggtgggcccggccagcgcgcggccccgacgaagtgg
ctcgacgaggccgccaccgtccagggacaccgtgacgagttggcggatctcgtcgacgcg
gtcgccgcgcggatgcgcgaggagtccgcgctggaccactcgtcgcagatggcgctcgcc
gcgacggtggcccgcgatcacccccaggtcggcgaggccgaacgtcgggcgttccgggtg
gtcctgctcgacgagtaccaggacaccggtcattcccagcgggtcctgctgacctccctg
ttcggcggaggtgcgggcccggtcccggcggtcacggcggtgggggacccgatgcagtcc
atatacgggtggcggggggcctcggcctccaacctcgaccgcttccgggacgacttcccc
cggcccggggggcagcagtcccacctccgcgagctcaccacgtcgtggcgcaaccctccc
gaggtactcgcactggccaaccggatcaccctgccgctgcgggaccgcccgggttcggtg
ccggtcccgcagctgcgagcgcgccccggggccgggcgcgcggacctgaggatggcggtg
ctggacacggcggaggccgagcgggactggctggccgactccatggcgtcccggtaccac
gcggcggtgtcggccggccgtgtcccgaccgccgccgtcctggtccggcgcaacagcgac
tccgggccgatcgcggaggcgctggagaagcgcggtctgccggtggaggtcgtcggggtg
ggcgggctcctggacgtccccgaggtggcggacgtggtctcgctgctcacggtggtcgcc
cgtcccggggccggtgcaccactggtacgcctgctcagcggctcccggttcgccctgggc
gctgccgatctggctgcgttggccagacgggcgtccgcgctctcgctccgtcgcccggtc
gacgccgggggagcgttgtcccgcgtcgaggagctcgaggacgtcctggacgccatcgcc
cgtggcgaggagaccgacgccgctggactcgcggacgcgctcgccgatccgggacccgag
ggtgactacagcccggccggagtcgcccggatcgccgagctctcccgcatcatcgcagcg
ctcagggccaggtcatccgcgctcccgaccaggctcgtggccgcggcggagcaggcgctc
ggtctggatgccgaggtgcgtctgcgggaacgcgcgggtggtggagaggcgcgcgaacag
ctcgacgagctccaggaggtggcggccgggttccgggcggaccggggttcgggtctggac
gccctcctggcgcacctcgacctggcgcgcaccgtggacggcgggctcgcccggggtgag
gtcgcggcgacgccgggtcgggtgcagatcctgaccgtgcactcggccaagggactggaa
tgggagatggtcgccgtgccccatctgtcggtcggggtcttcccgtccgaccgggcgccc
cagacctctgtgcggtccgccacccacctccccgaggaactgcgcggagaccgggagtcc
ggggacaatcccggcggggtgccggtgccccggctcgacgacgtggcagaccgcaagctc
ctcgaggccgcgctcaggggccacatcgaccgcgtcgcacggcgttccctcgacgaggac
cgacgactgttctacgtggccgtcacccgcgcggaacactctctgctgctctcggcgtcg
cactggcacgggagcggttccacaccccgggggccgtcggagttcctcgacgaggccctc
aggtcctgcgggggccccgaaccactgggggagatcgaccacctcgtcgtcacaccctcc
gccaccaacccggccacctcgtcggtggtggaagccacctggccgcgcgcggcggcatcc
gaccgcaggtccgcggcccacgccgtggagacggccgacccggtggacccggaggccgac
ccggcccccgatcacggcgccgcccgtcattggcacctcgtggcggcgccactgctcgcg
gacgctcgccgagcggccgaacggcgcgacgcggtggtcctcccacggcgactgaccgcg
ggcgaggtggtggccatggcgaccgaccccgacgcgttcgccgaccgactccgcaggccc
gtgccgttccggccggaccggttcgcccggcgcggcacgcggttccacctctggctggaa
caccgcttcggggccacccatctgctcgacatcgacgatctccccggcgccggggaccag
ggcgccgtggacgggttgtcggaggcggacctcgcggcactgcaacacgccttcgagacg
tcgcgatgggcgcgactgacaccggaggcggtggaggtgcccttcgaggtgggactcgga
gagcatctgctgcgtggccggatggacgcggtgttcgccgacggggacgactggatcgtc
gtggactggaagaccgggcgggtgcctggtgccggggagttgccctccgtctcgctccag
ctggcggtctaccgctacgcgtgggcgaaggtcgtctcggcgaggctcggtcagccgatc
gagctcggcagggtccgggcggccttccactacgttcgcgacggaaggacggtcgagccg
accgatctccccgacgcggacgaactgctccggctcctctccgccggtccggggagaggc
cggttgttgtccgacggagaccgatag
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