Dietzia psychralcaliphila: A6048_04825
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Entry
A6048_04825 CDS
T05437
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dpc
Dietzia psychralcaliphila
Pathway
dpc03420
Nucleotide excision repair
dpc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6048_04825
03430 Mismatch repair
A6048_04825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpc03400
]
A6048_04825
Enzymes [BR:
dpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6048_04825
DNA repair and recombination proteins [BR:
dpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6048_04825
MMR (mismatch excision repair)
Other MMR factors
A6048_04825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_12
DUF4129
DUF7129
Zn_ribbon_FGT1_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AWH94924
UniProt:
A0AAD0JQG1
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All DBs
Position
1086786..1088906
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AA seq
706 aa
AA seq
DB search
MNDLRRGRESALDGLDPQQRRAVLAPRGPVCILAGAGTGKTRTITRRIAHLVTTGHVRGD
QVLAVTFTARAAGELRMRLAGLGVADAGTGPVQARTFHSAALRNLSYFWPRVYGEEPWQL
LDGQFRAVAQAVRRVGLDPSTETIRDVLTEIGWAKSSLLTPDTYAEQAVALGRDLPAPAP
EVARAFRAYEDLKVSGPVRMLDFDDLLGHMAELVEEVPAIAEEFRDRYRCFVVDEFQDVT
PAQQRLLSAWLGRRDDLTVVGDVNQTIYSFAGADPDYLLGFAERHPQATVVRLESDYRST
PQVVDLANAVIGAGAGRFRSAGLTLRGMRPAGPDPVLTEYPDEDAEADAVAGAIADLVHG
GLDPSEIAVLYRVNAQSERIEAALDEVGIGYRLKGGEGFFERTVIRRAMSTIDRLVDGTD
EAVTEEHSSLTDPTDVVRVIRASLEPLGLTAAEPSGTQAREKWESLTALVGLVEEIATTE
ARPGLLPVVAGLRARAAARHAPDQRGVTLASFHAAKGLEWDAVFLLGVHEGSLPISHAIK
AGPDAIEEERRLLYVGITRAREHLSVSWSRSRRAGGRATRRPSRFLDPVRPAPAPAGTRQ
AAESPDKGRCRGCGERLTGPMHRALGSCPDCSVEIDTGLFERLRDWRRETSERIGKPAYT
VFTNDTLVQIARERPADTSSLGRIGGIGAHKLGEYGDDVLRLVREG
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgacttgcgacgtggccgggagtcggcgctcgacggattggacccccagcagcgg
cgggccgtcctcgcgccccgtggtcccgtctgcatcctcgcgggcgcgggcaccggcaag
acgcgcaccatcacccggcgcatcgcccacctggtgaccaccgggcacgtgcggggggac
caggtcctggcggtcacgttcaccgcccgtgcggcgggggaactccgcatgcggctcgca
ggcctgggcgtggcggacgccgggacggggccggtccaggcgcggaccttccactctgcg
gccctgcgcaatctctcctacttctggccccgtgtctacggtgaggagccctggcaactg
ctcgacgggcagttccgtgcggtcgctcaggcggtgcgccgggtcggactggatccctcg
acggagaccatccgggacgtcctcaccgagatcggttgggccaagtccagtctgctcacc
cccgacacgtacgccgagcaggcggtcgctctcggtcgtgacctccccgctcctgccccg
gaggtggcacgggcgttccgggcgtacgaggacctgaaggtgtccggtccggtccggatg
ctcgacttcgacgacctgctgggacacatggcggaactggtggaggaggtcccggcgatc
gcggaggagttcagggaccgctaccggtgcttcgtggtggacgagttccaggacgtcacc
cccgcccagcagcgactgctgtcggcctggctcggacgccgcgatgacctcaccgtggtg
ggagacgtcaaccagaccatctactcgttcgccggtgcggacccggactacctgctgggt
ttcgccgagcgccacccccaggcgaccgtcgtccgcctggagtcggactacaggtcgacc
ccgcaggtcgtcgacctggccaacgcggtgatcggggccggcgccgggcggttccgttcg
gccgggctcaccctccggggtatgcgccctgcggggcccgaccccgtcctcaccgagtac
ccggacgaggatgcggaggcggacgcggtcgcgggggcgatcgctgatctggtccacggt
ggactcgatccctcggagatcgcggttctctaccgtgtgaacgcgcagtcggaacgaatc
gaggccgcgctggacgaggtgggcatcggctaccggctcaagggtggggagggcttcttc
gagaggacggtgatcaggcgcgcgatgtcgacgatcgacagactggtcgacggcacggac
gaagcggtgactgaagagcactcctcgctcaccgatcccaccgacgtcgtccgggtgatc
cgggcgtctctggagccgctgggtctcacggctgccgaaccgtcgggcacccaggcgagg
gagaagtgggaatccctgaccgcgttggtgggactggtggaggagatcgccaccaccgag
gcccgtcccgggctactgccggtggtcgccgggctgagggcccgcgctgccgcgaggcac
gcgcccgaccagcgcggggtcaccctggcgtcattccacgccgccaaggggctcgagtgg
gatgcggtgttcctcctcggggtgcacgagggcagtctgcccatcagccacgcgatcaag
gcggggccggacgccatcgaggaggagcggcgactgctgtacgtggggatcacccgggcg
agggagcacctgtccgtctcgtggagccgcagtcggcgggccgggggccgcgcgacacgt
cgccccagccgcttcctcgatccggtgcgccctgccccggcacctgccggcacccgacag
gcggccgagtcgcccgacaaggggcgctgccgtggatgcggggagcggctcaccgggccg
atgcaccgggcgttgggatcgtgccccgactgctcggtggagatcgacaccgggttgttc
gagcggctacgcgactggcgaagggagacgtcggagcgcatcggcaagccggcgtacacg
gtgttcaccaacgacacgctcgtgcagatcgcccgtgagcgccccgcggacaccagctcg
ctggggcgcatcggcgggatcggggcgcacaaactcggcgagtacggggacgatgtgctg
cgcctggtcagggagggctga
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