Dietzia psychralcaliphila: A6048_06230
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Entry
A6048_06230 CDS
T05437
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dpc
Dietzia psychralcaliphila
Pathway
dpc03030
DNA replication
dpc03430
Mismatch repair
dpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A6048_06230
03430 Mismatch repair
A6048_06230
03440 Homologous recombination
A6048_06230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpc03032
]
A6048_06230
03400 DNA repair and recombination proteins [BR:
dpc03400
]
A6048_06230
Enzymes [BR:
dpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A6048_06230
DNA replication proteins [BR:
dpc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A6048_06230
DNA repair and recombination proteins [BR:
dpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A6048_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
UVR
GIY-YIG
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
DUF4170
Motif
Other DBs
NCBI-ProteinID:
AWH95144
UniProt:
A0AAD0NPP1
LinkDB
All DBs
Position
complement(1396567..1398219)
Genome browser
AA seq
550 aa
AA seq
DB search
MPTPPTRVPVRAPGPQGVQAAFDELEPTLSEVTFVVVDLETTGTRPGTDEITEIGAVRVR
GGEVRAELSTFVAIDGALPGHISRLTGIAPDDLVGAPSLGEVMATFLEFSRGAVLVAHNA
RFDLGFLRAAATSTDHQWPDPPSVCTLALARRVLHRGETRGHRLGELAAHLGSAVEPNHR
ALQDARATVDVLHALISRVGDCGVSTLSELRAYDGRLAPEVRRRAALTESLTPGPGVYLF
RDGSGGALYVGSSGSVRRRARSYYSGADTRSRMRTMVGLAASVESVPCAHLLEAWTVEER
LIDSLQPPYNRRSRNPRRGWWLSPPSGRAIRGQVARNPEHPFALGPFRRAEDARSAWQDL
VEATGSSPDAEQWATLVTGRDSATVRAMVDRIDSAAAAGAFERAARLRDRAAVLVRILTR
QQELAATACLPELVLAQPGPGRTWAVAIVRHGRLAASGIVPAGAAPLPVIDSLRAGATTV
QPGPGPFSGATAAEIRNVHRWIDSAPTRIVSVAGCWTLPLDGAHTLTDWADRAERAASGI
SGAEVSSVPR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgccccctactcgagtcccggtccgcgcgcccgggccccagggggtccaggcg
gcgttcgacgaactcgagccgacgctctccgaggtgaccttcgtcgtggtcgacctggag
accaccggcacccggcccgggacggatgagatcaccgagatcggcgcggtccgggtacgg
ggtggcgaggtccgggcggagctgtcaacgttcgtcgccatcgacggtgccctgccgggg
cacataagcaggctcaccggtatcgcgcccgacgatctcgtcggggccccttcgctcgga
gaggtgatggcgacgttcctggagttctcccgcggcgcagtccttgtggcgcacaacgca
cggttcgatctcggattcctgcgtgcggcggccacgtcgaccgaccaccagtggcccgat
ccgccgtcggtctgcaccctcgcactggcacggcgggtgctccaccggggagagacccgc
ggccaccgtctcggtgaactcgccgctcacttgggatcggcggtcgagcccaaccaccgc
gcactccaggacgcccgcgccaccgtcgacgtgctccacgccctcatctccagggtcgga
gactgcggggtgtccaccctctccgagctccgtgcgtacgacggtcgtctcgcccccgag
gtgcggcgccgcgccgcgctgaccgagtcgctcacccccggccccggcgtctacctcttc
cgggacggttcgggaggcgccctgtacgtgggctcatccggttccgtgcggagaagggca
cgctcttattattccggcgcggatacccgcagcaggatgcggaccatggtcgggctggcc
gcgagtgtcgagtcggtgccgtgcgcgcacctcctggaggcgtggaccgtcgaggagcga
ctcatcgactccctgcagccgccgtacaaccggcggtcccgcaatcctcgtagagggtgg
tggctctccccaccctccggacgggcgatccgtgggcaggtcgcgaggaacccggaacac
ccgttcgccctcggcccgttccggcgagccgaggatgccagatccgcgtggcaggacctt
gtcgaggcgaccggatcctctcctgacgcggagcagtgggcgacgctggtcaccggccgg
gactccgcgactgtccgggcgatggtggaccgcatcgactcggccgcggcggccggggca
ttcgagcgtgcggcccggctgcgcgatcgcgcggcggtcctcgtccggatcctcacccgc
cagcaggagctcgccgccaccgcctgcctgcccgagctcgtcctggcccagcccggcccc
ggacggacatgggcggtggcgatcgtgcgtcacggccgactcgccgcctctgggatcgtt
ccggccggcgccgcaccccttcccgtcatcgactcgctcagggcgggcgccacgaccgtg
cagcccggtcccggaccgttctccggggcaaccgcggcggagatcaggaacgtccacaga
tggatcgactccgcacccacccgcatcgtgtcggtggcgggctgctggacactccccctc
gacggcgctcacaccctgacggactgggcggaccgcgccgaacgggcggcctcggggatc
agcggggcagaagtcagttccgttccgcgctga
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