Dietzia psychralcaliphila: A6048_06480
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Entry
A6048_06480 CDS
T05437
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dpc
Dietzia psychralcaliphila
Pathway
dpc03030
DNA replication
dpc03430
Mismatch repair
dpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A6048_06480
03430 Mismatch repair
A6048_06480
03440 Homologous recombination
A6048_06480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpc03032
]
A6048_06480
03400 DNA repair and recombination proteins [BR:
dpc03400
]
A6048_06480
Enzymes [BR:
dpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A6048_06480
DNA replication proteins [BR:
dpc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A6048_06480
DNA repair and recombination proteins [BR:
dpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A6048_06480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AWH97270
UniProt:
A0AAD0NNW2
LinkDB
All DBs
Position
1452169..1455675
Genome browser
AA seq
1168 aa
AA seq
DB search
MLDGMAQINPMFAEAKRLGMPAVGMTDHGNMYGSSDFYKQAKKTGITPIIGIEAYVAPES
RFNKKRVLWGEKHQKSDDVAGSGAYTHMTMVAENATGLRNLFLLSSLASYEGQLGKWARM
DAEILAEHSEGIIATSGCPSGEIQTRLRLGHHKEAYEAAEKWQSIFGKDSFFLELMDHGI
DIERRVREDLLKLGKDLGMPPLVTNDCHYVTREQSHAHEAMLCVQTGKTLADENRFKFDG
DGYFLKSAAEMRAQWDTEVPGGCDNTLWVAERVQPYDEIWAPKDRMPKFPVPEGETEDTW
LAREVHKGLEWRFPAGVPQEYLDRAEFELEVIKGKGYPGYFLVVGDLIEYARSIGIKVGP
GRGSAAGALVAYALKITNIDPIEHGLLFERFLNPERPSAPDIDIDFDDRRRGEMIRYASD
KWGADKIAQVITFGTIKTKAAIKDAARVNFGQPGYAIADRITKALPPAVMAKDIPLSGIT
DPKHERYGEASEVRQLIETDPDVKRIYDTARGLEGMVRQAGVHACAVIMSSEPLLDVIPM
WKRAQDGALITGWDYPSCEDIGLLKMDFLGLRNLTVIGDCLENIKSNRGEDIDLDTLSTD
DQATYDLLASGDTLGVFQLDSGGMRELLKRMKPTGFNDIVAALALYRPGPMGMGTHWNYA
DRKNGKQELTPIHPELEEPLKVILGETHGLIVYQEQIMAISRELAGYTAGEADGFRKAMG
KKKAEVLAAEYEKFSGGMFERGFSKAAVDALWGTIEPFASYAFNKSHAAGYGLVSFWTGY
LKANYPAEYMAALLTSVGDDKDKAALYLSNCRQMGIKVLPPSVNESLTNFASVGTDIRFG
MGAVRNVGSHVVDSVVTARKEKGAFTDFSDYLAKIDQTACTKKVTESLIKAGAFDSLEHP
RKGLFLVHADAVESVMSTKKAEAVGQFDLFGGGDGDDAGGASAFSDVFAVRVPDEEWDIK
QKLALEREMLGLYVSGHPLDGLESALAAKTDTSIATIHEGELPHGTAVTIGGIISGVDRR
VNKNGEPWAIVTIEDFHGSVEVLFFPKTYRLAALDIAEDAVVLVKARINIREDRVSVFGD
TLEVPDLVVGGNGAPLALTLPTRMCTIETVTALKQVLGRHPGPSDVHLRLVNGSSSTVLR
LDDHLRVETSSSLMGDLKALLGPGCLTG
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgggatggcgcagatcaacccgatgttcgcggaggccaagaggctcgggatg
cccgcggtgggcatgaccgaccacggcaacatgtacgggtcctcggacttctacaagcag
gccaagaagaccgggatcacaccgatcatcgggatcgaggcgtatgtcgcccccgagtcg
cggttcaacaagaagcgcgtgctgtggggcgagaagcaccagaagagcgacgacgtcgcc
ggctcgggcgcctacacccacatgaccatggtcgccgagaacgccacaggtctgcgcaac
ctgttcctgctgtcctcgctggcctcgtacgagggccagctgggcaagtgggcccggatg
gacgccgagatcctggccgagcactccgaggggatcatcgccacgtcgggctgcccctcc
ggcgagatccagacgcgcctgcgcctgggccatcacaaggaggcgtacgaggcggccgag
aagtggcagtcgatcttcgggaaggacagcttcttcctggagctcatggaccacggcatc
gacatcgagcgacgggtccgggaggacctgctcaagctgggcaaggatttggggatgccc
ccgctggtgaccaacgactgccactacgtcacccgcgagcagtcccacgcgcacgaggcg
atgctgtgcgtgcagacgggtaagaccctcgccgacgagaaccgtttcaagttcgacggc
gacgggtacttcctcaagtccgcggccgagatgcgcgcccagtgggacaccgaggtccct
ggtggttgcgacaacacactgtgggtggccgaacgggtccagccctacgacgagatctgg
gcccccaaggaccggatgcccaagttccccgtgccggagggcgagacggaggacacctgg
ctggcccgggaggttcacaagggcctggagtggcgcttccccgcgggggttccccaggag
tacctggaccgcgcggagttcgagctcgaggtgatcaagggcaaggggtaccccgggtac
ttcctggtggtcggtgacctcatcgagtacgcccgctccatcggcatcaaggtcggcccg
ggccgggggtccgccgcgggtgcgctcgtggcgtacgcgctcaagatcaccaacatcgat
ccgatcgagcacggactgctgttcgagcggttcctcaacccggaacgcccgtccgcgccg
gatatcgatatcgacttcgacgaccgtcgccgtggcgagatgatccgctacgccagcgac
aagtggggcgccgacaagatcgcccaggtcatcacgttcggcaccatcaagaccaaggcc
gccatcaaggacgccgcccgcgtgaacttcggccagcccggatacgcgatcgccgaccgg
atcaccaaggccctgccccccgcggtcatggccaaggacatccccctctcgggcatcacc
gaccccaagcacgagcggtacggcgaggcctcggaggtccgccaactcatcgagaccgac
ccggacgtcaagcggatctacgacacggcccgcggactggagggcatggtccgccaggcg
ggtgtccacgcgtgcgccgtgatcatgtcgtccgagccgctgctcgacgtgatccccatg
tggaagcgggcgcaggacggggccctcatcaccgggtgggactacccctcgtgtgaggac
atcggcctgctcaagatggacttcctgggccttcgcaacctcacggtgatcggcgactgc
ctggagaacatcaagagcaaccgcggcgaggacatcgacctcgacacgctcagtaccgac
gaccaggcgacctacgacctgctggccagcggcgacaccctgggcgtgttccagctggac
tccggcggcatgcgcgagctgctcaagcggatgaagcccaccggcttcaacgacatcgtg
gccgcgctcgccctgtaccgacccggcccgatggggatggggacgcactggaactacgcc
gaccgcaagaacggcaaacaggagctgacccccatccacccggagttggaggaaccgctc
aaggtcatcctcggggagacccacggcctgatcgtgtaccaggagcagatcatggccatc
tcccgcgagctcgcgggatacacggccggtgaggccgacggcttccgtaaggccatgggc
aagaagaaggccgaggtcctggccgccgagtacgagaagttctccggcggcatgttcgag
cggggcttttccaaagctgcggtcgacgcactgtggggcaccatcgaacccttcgcctcg
tacgcgttcaacaagtcccacgccgccggctacgggctggtctccttctggaccggttac
ctcaaggccaactatccggccgagtacatggccgccctgctcacctccgtgggtgacgac
aaggacaaggctgcgctgtacctgtccaactgccgtcagatgggcatcaaggtgctaccg
ccatccgtcaacgagtcgttgaccaacttcgcgtcggtcggcacggacatccgcttcggt
atgggcgcggttcgcaacgtcggctcccatgtcgtggactccgtcgtgaccgcgcgtaag
gagaagggggcgttcaccgacttctccgactacctggccaagatcgaccagaccgcgtgc
accaaaaaggtcacggagtccctgatcaaggccggggcgttcgattccctcgagcatccc
cgcaagggactgttcctggtccacgccgatgcggtcgaatcggtcatgtccaccaagaag
gccgaggcggtgggccagttcgacctgttcggcgggggagacggagacgacgcggggggc
gcctccgccttcagcgacgtgttcgcggtgcgggtccccgacgaggaatgggacatcaaa
cagaaactggcgctcgagcgggagatgctcgggctgtacgtctccggccacccgctcgac
ggactggagtccgcgctcgcggccaagaccgacacgtcgatcgccaccatccacgaggga
gaactcccccacggcaccgccgtgacgatcggcgggatcatctccggggtggaccgtcgg
gtcaacaagaacggcgagccgtgggcgatcgtcaccatcgaggacttccacggcagcgtc
gaggtgctcttcttccccaagacgtatcgactcgccgccctcgacatcgccgaggacgcg
gtcgtcctggtcaaggcgcgcatcaacatccgcgaggaccgcgtctccgtcttcggcgac
accctcgaggtgccggacctggtcgtggggggcaacggcgccccgctggcgctgacgctg
cccacgcgcatgtgcaccatcgagaccgtcaccgccctcaaacaggtcctcgggcggcat
cccgggccctccgatgtccacctgcggctggtcaacgggagttcctccacggtgttgcgg
ctggacgatcatctgcgggtcgagacgtcgtcctctctcatgggggatctcaaggcgctg
ctcgggccgggttgcctcaccggatga
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