Dietzia psychralcaliphila: A6048_12300
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Entry
A6048_12300 CDS
T05437
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dpc
Dietzia psychralcaliphila
Pathway
dpc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dpc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A6048_12300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpc03021
]
A6048_12300
03400 DNA repair and recombination proteins [BR:
dpc03400
]
A6048_12300
Enzymes [BR:
dpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A6048_12300
Transcription machinery [BR:
dpc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A6048_12300
DNA repair and recombination proteins [BR:
dpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A6048_12300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AWH96149
UniProt:
A0AAD0NQK0
LinkDB
All DBs
Position
complement(2711630..2712664)
Genome browser
AA seq
344 aa
AA seq
DB search
MLISQRPTLTEEVVSENRSRFVLEPLEPGFGYTIGNSLRRTLLSSIPGAAVTSIRIEGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSVEDEPVTMYLKKQGPGAVTAGDIVPPSGVEVHN
PDLHIATLNEKGRLEIELVVERGRGYVPAGLNKDAGHEIGRIPVDSIYSPVLKVTYKVEA
TRVHQRTDFDRLVLDVETKNSMTARDALASAGKTLVELFGLARELNDEAEGIEIGPSPAE
ADHIAAYGMPIDDLDLSVRSYNCLKREGVHTVGELVARSESDLLDIRNFGQKSIDEVKVK
LVELGLSLKDAPPGFDPASVAGYDAETGTWTDEGGEDYAETEQL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcccagcggcccaccctcaccgaggaggtcgtctccgagaaccgctcgcgg
ttcgtgctcgagcccctcgagcccggtttcggctacaccatcggcaactccctgcggcgc
acgctgctgtcgtccatcccgggcgcggccgtgaccagcatccgcatcgagggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggatgtcaccgacatcatcctcaacctc
aagggcctggtcgtctcgtccgtcgaggacgagccggtcaccatgtacctcaagaagcag
ggcccgggtgccgtcaccgcaggtgacatcgtcccgccgtccggcgtcgaggtgcacaat
ccggacctgcacatcgccactctcaacgagaagggccgtctggagatcgagctggtcgtc
gagcgcggtcgtggctacgttcccgcagggctcaacaaggacgcgggtcacgagatcggc
cgtatcccggtcgactcgatctactcgcccgtcctcaaggtgacctacaaggtcgaggcc
acccgtgtgcaccagcgcacggacttcgaccgcctggtcctggacgtcgagaccaagaac
tcgatgaccgcccgtgacgccctggcgtccgcgggtaagacgctggtcgagctcttcggg
ctggcgcgggagctcaacgacgaggccgagggcatcgagatcgggcccagcccggccgag
gccgatcacatcgccgcatacggcatgccgatcgacgacctggacctgtccgtccggtcc
tacaactgcctcaagcgcgagggcgtccacaccgtgggcgagctcgtggcgcgcagcgag
tcggacctgctcgacatccgcaacttcggtcagaagtcgatcgacgaggtcaaggtcaag
ctcgtggagctgggcctgtcgctcaaggatgcgccccccgggttcgatcccgcctcggtc
gccggctacgacgccgagaccgggacgtggacggacgagggcggcgaggattacgccgag
accgagcagctctga
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