Deinococcus peraridilitoris: Deipe_0089
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Entry
Deipe_0089 CDS
T02381
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dpd
Deinococcus peraridilitoris
Pathway
dpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Deipe_0089
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpd02000
]
Deipe_0089
Transporters [BR:
dpd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Deipe_0089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AFZ65697
UniProt:
K9ZXR6
LinkDB
All DBs
Position
112308..113948
Genome browser
AA seq
546 aa
AA seq
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MKRTALSVMTLLTATLTATAVAQQPKNVFTVVRSSQWGAQNLNPFAPGDQHLPPTNSAIY
ESLFYVNPLDGKATPVLGTKYNWSKDNKTLTITTRDGVKWNDGKPFSAGDAAFTFNYLKQ
FPALDTSGIWKNGLTSVKATGSNTLTFAFDKPNTPIFQYLAGQMIVPEHVWSAIKDPVTE
TNTKPVATGPFTFDSYSQQALRVLKNPNYWMKGQPYVDAVVWYATNGNDAALLKLLKGEA
DYGYVGVSDPEGQYAKKGENLSYYWPVTGDNYLYFNTAKAPFNDPAFRRAISQAINTKNV
AEKAYAGVADAAHSSGVIPAQQQQWLPASAKNLEVKFDAVAADTALTKAGYKKNAQGRRL
GKDGKVLPSFKILVGAGWTDFITMAQVIGEDLKKVGVNTQIDQQAWSSYAGGLQTGTYDM
GISWGWGGGPNPYYLYNQTFAPEYSAPVGKTAASNLSRYTNPAVTKALTAFKGTSDTAQQ
KKLMGTVITTVMQDMPWLPLTDRFNFSLYNTAKFTGMPTKQNPYTAGEADDVAAARLMYL
NVKPKQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaccgctttgtccgtcatgaccctgctgaccgccaccctgaccgccacggct
gtcgcgcagcaacccaagaacgtcttcactgtcgttcgctccagccagtggggcgcccag
aacctcaatcccttcgcgcccggcgaccagcacctgccgcccaccaacagcgccatctac
gagtcgctattttatgtcaacccgcttgacggcaaggccacgccggtcctgggcaccaag
tacaactggagcaaggacaacaagaccctcaccatcaccacccgcgacggcgtgaaatgg
aacgacggcaagcccttcagcgcgggcgacgcggccttcaccttcaattacctcaagcag
ttcccggccctggacacctcgggcatctggaagaatggcctcaccagcgtgaaggccacg
ggtagcaacaccctcaccttcgccttcgacaagcccaacacgcccatcttccagtacctg
gccgggcagatgatcgtgcccgagcacgtgtggagcgcaatcaaggatccggtgaccgag
accaataccaagcccgtcgccaccggtcccttcaccttcgacagctacagccagcaggcg
ctgcgtgtcctcaagaatcccaactactggatgaagggacagccctatgtggacgccgtc
gtgtggtacgccaccaacggcaacgacgcggcgctgctcaaactgctcaagggcgaagcg
gactacggctacgtgggcgtgtccgaccccgaaggccagtacgccaagaaaggcgagaac
ctcagctactactggccggtgacgggggacaactacctgtacttcaacaccgccaaggca
cccttcaacgatcccgccttccgccgcgccatctcccaggccatcaataccaagaacgtg
gccgagaaagcctacgcgggtgtggccgacgcggcccacagcagcggggtcatcccggcg
cagcaacagcagtggctgcccgccagcgccaagaatctggaagtgaagttcgacgccgta
gccgccgacactgccctcaccaaggcgggctacaagaagaacgctcagggccgccgcctg
ggcaaggacggcaaggtgctgccttccttcaagatcctggtgggtgccggctggaccgac
ttcatcaccatggcgcaggtcatcggtgaagacctcaagaaggtcggcgtgaacacccag
atcgaccagcaagcgtggagctcgtacgcgggtggtctgcagaccggcacgtacgacatg
ggcatcagctggggttggggcggcggtcctaacccgtattacctgtacaaccagaccttc
gcgcccgagtacagcgcgccggtcggcaaaacggcggcttcgaacctctcgcgctacacc
aatcccgccgtcaccaaggcgctcacggcgttcaagggcaccagcgacaccgcccagcag
aagaagctgatgggcaccgtcatcaccacggtcatgcaggacatgccctggctgccgctg
accgaccgcttcaacttctcgctgtacaacaccgcgaagttcaccggcatgcccaccaag
caaaatccctacaccgccggtgaggccgacgacgtggccgctgcacgcctgatgtacctc
aacgtcaagcccaagcagtaa
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