Deinococcus peraridilitoris: Deipe_0550
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Entry
Deipe_0550 CDS
T02381
Name
(GenBank) Holliday junction DNA helicase, RuvB subunit
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
dpd
Deinococcus peraridilitoris
Pathway
dpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Deipe_0550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpd03400
]
Deipe_0550
Enzymes [BR:
dpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Deipe_0550
DNA repair and recombination proteins [BR:
dpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Deipe_0550
RecFOR pathway proteins
Deipe_0550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RuvB_C
AAA_lid_4
AAA
AAA_5
Mg_chelatase
nSTAND3
AAA_14
AAA_16
TsaE
ABC_tran
TIP49
Sigma54_activ_2
AAA_3
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AFZ66145
UniProt:
K9ZZH6
LinkDB
All DBs
Position
564503..565492
Genome browser
AA seq
329 aa
AA seq
DB search
MEADLTLRPRSLSDYVGQSRLKEKLAVYLKAAKGRGEALDHTLLFGPPGLGKTTLSHIIA
YEMGVNIRVTSGPAIEKPGDLAAILTNSLEEGDVLFIDEIHRLGRVAEEHLYPAMEDFKL
DIVLGQGPAARTIELPIPRFTLVGATTRPGLITAPMRSRFGIIEHLEYYTPEELATGLLR
DARLSGYGLDEEAAIEIGARSRGTMRIAKRWLRRVRDYAEVAGEKNISLARAQDALDKLG
LDSAGLDERDIKMLEAMVHRFSGGPVGVDTLATALSEDANTIEDVYEPYLIQLGFIKRTP
RGRVVTAHAYDHLGLPYTGYEDEGRFLSN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgatctcacgctacgtccccgcagcctttcggattacgtggggcaaagccga
ctgaaagaaaagctcgcggtgtacctcaaggcggccaaaggacgcggcgaagccctcgat
cacacgctgctcttcgggccccccggactgggcaagaccaccctgtcgcacatcattgcg
tatgaaatgggagtcaatatccgcgtcacgagtggccctgccatcgaaaagcccggtgac
ctcgcggccatcctcacaaacagtctcgaagagggtgacgtgctgttcatcgacgagatc
caccgcctgggacgcgtcgccgaagagcacctgtatccggcgatggaagatttcaagctc
gatatcgtgctgggtcagggcccggcagcccgcaccatcgagttgcccattccgcgtttc
acgctggtcggcgccaccacccgtcccggtctgatcaccgcaccgatgcgttcgcgcttt
ggaatcatcgagcacctggagtactacacgcccgaggaactcgccaccggcctgctgcgt
gacgcgcgcctgagcggctacggactcgacgaggaagcagccatcgagatcggcgcgcgt
tcgcggggcaccatgcggatcgccaagcgctggctgcgccgggtacgtgattacgccgaa
gtggccggtgagaagaacatcagcctggcgcgggcacaggacgccctcgacaagctcggc
ctcgactcggcgggcctggacgagcgcgacatcaagatgctcgaagcgatggtccaccgc
ttctcgggtgggccggtcggcgtggatacgctggccaccgcgctcagcgaggacgccaac
accatcgaggacgtgtacgagccgtacctgatccagctgggcttcatcaagcgtacgccg
cgcggccgggtggtgaccgcccacgcctacgatcacctggggttgccctacaccggatac
gaggacgaaggccgctttctgagcaactga
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