Deinococcus peraridilitoris: Deipe_0699
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Entry
Deipe_0699 CDS
T02381
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dpd
Deinococcus peraridilitoris
Pathway
dpd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Deipe_0699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpd03019
]
Deipe_0699
03016 Transfer RNA biogenesis [BR:
dpd03016
]
Deipe_0699
Enzymes [BR:
dpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Deipe_0699
Messenger RNA biogenesis [BR:
dpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Deipe_0699
Transfer RNA biogenesis [BR:
dpd03016
]
Prokaryotic type
tRNA degradation factors
Deipe_0699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
Motif
Other DBs
NCBI-ProteinID:
AFZ66278
UniProt:
K9ZX98
LinkDB
All DBs
Position
707070..709241
Genome browser
AA seq
723 aa
AA seq
DB search
MTLSTARKYTTTLGGRELSIETGKVAKLVSGAVTLRYGETVLLVTAQASERPSTLDFLPL
TVEFEERHYAVGKIPGSFHRREGRPGERAILSARITDRQIRPLFPKGYRQETQVIITVQS
ADQQNAPDVLGALGASAALSVSDIPWKGPTACVRVGRVDGAYIINPTGEQLERSEMDLVV
AGTRDAVMMVEAGASEADEELLVGAIEFAHAEMQGVLSLIEQMRAEVGKEKFEPVLPSDA
ASELVPELALAAREAGLREALLTPKKKDRSVALKGLRDGLIARHVPDAEAEGASEKAALL
KSAWEKVEKAELRRLILEEDLRADGRDGRTIRPIWIEAPYLPRAHGSALFTRGETQVLGT
TTLGTERDEILIDDLTEETGDKFLLHYNFPPYSTGEVKRMGGQSRREIGHAYLAKRAIRA
VLPPFEQFPYVIRVVGDVLESNGSSSMATVCAGSLSLMDAGVPLRSAVAGVAMGLVMEEG
RYRILTDILGLEDALGDMDFKVCGTAQGVTALQMDIKIGGITPQIMREALAQAREARLFI
LGKMTEALPAPRSEMSLYAPRILTTKINPEKIGSVIGPGGKNIRELEAMGAQITVDEDGT
IRIFSSDADAAQRVLERIQNTTRQAKVGEEFEGTVVKTAAFGAFINLFPGQDGMLHISQM
SEERVNAVEDVMNVGDKVMVKIVGIDDRGKIDLIRPELEGKIAPRAPREGGRDRGPRPDR
DRR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtgaccctttccacggcacgcaaatacaccaccacgctgggcgggcgcgaactcagcatt
gaaaccggcaaggttgccaagctggtctcgggcgccgtcaccctgcggtacggcgagacg
gtgctgctggtcacggcccaggcgagcgagcgaccctcgaccctcgattttttgccgctg
accgtggaattcgaggagcggcactacgcggtcggcaagattcccggctcgtttcaccgc
cgtgaagggcgtccgggagagcgggccattctgagcgcgcgcatcaccgaccgccagatt
cgcccgctgtttcccaagggataccgccaggaaacccaggtgatcatcacggtgcagtcg
gccgaccagcaaaacgcgccggacgtcctgggcgcgctgggtgcctcagcggcgctgtcg
gtcagtgatattccctggaaaggccccactgcctgcgtacgcgtcggtcgcgtggatggc
gcgtacatcatcaatcccacaggggagcagctggagcgctccgagatggacctggtcgtc
gccggcacgcgtgacgcggtcatgatggtcgaggccggggcaagtgaagcggacgaggaa
ctgctcgtcggcgccatcgagttcgcgcacgccgagatgcaaggcgtactgagcctgatc
gagcagatgcgcgcagaggtcggcaaggaaaaattcgagccggtgctgcccagtgacgcg
gcctcggaactggttcccgagctggccctcgcggcccgtgaagccggtctccgcgaggcc
ctgctgaccccgaagaaaaaggaccgcagcgtggcgctcaagggactgcgtgacgggctg
atcgcccggcacgttcccgatgccgaagccgaaggagcaagtgaaaaagccgcgctgctc
aaatcggcctgggaaaaagtcgagaaggccgagctgcgccgcctgattctcgaagaagat
ttgcgcgccgacggacgcgacggccggaccatccgtccgatctggatcgaggcgccctac
ctgccccgtgcgcacggcagcgcgctcttcacgcgtggcgaaacgcaggtgctgggcacc
accacgctgggcaccgaacgcgatgagattctgatcgacgacctgaccgaggagacgggt
gacaagttcctgctgcactacaacttcccgccttactcgaccggggaagtcaagcgcatg
ggcgggcagtcgcgccgcgagatcgggcacgcctacctggccaagcgcgccattcgcgcg
gtgctgcctcctttcgagcagtttccgtacgtaattcgcgtggtcggtgacgtgctggag
tccaacgggtcgagctcgatggcgaccgtttgcgcgggcagtttgagcctgatggacgcg
ggcgtgccgctgcgctcggcagtcgcgggcgtggcgatgggcctcgtgatggaagagggc
cgctaccgcattctcaccgacatcctcgggcttgaagacgcgttgggcgacatggacttc
aaggtctgcggcaccgcgcagggcgtcaccgcgctgcagatggacatcaagatcggcggg
atcaccccgcagatcatgcgtgaggcgcttgcccaggcgcgcgaggccaggctcttcatt
ctcggcaagatgaccgaagcgctgcccgcgccgcgcagcgagatgagtttgtatgcgccg
cgcattctgaccaccaagatcaatcccgagaagatcggctcggtcatcgggccgggtggc
aagaacatccgcgaactcgaagccatgggcgcgcagatcaccgtggacgaggacggcacc
atccggatcttcagcagcgacgccgacgccgcacagcgcgtgctggaacgcattcagaac
accacccgtcaggccaaggtcggtgaggaattcgagggaacggttgtcaagacggccgcc
tttggggcctttatcaacctcttccccggtcaggacggcatgctgcacatctcgcagatg
agcgaggagcgcgtcaatgccgtcgaagacgtcatgaacgtcggcgacaaggtgatggtc
aagatcgtcggtatcgacgaccggggcaagattgacctgatccgcccggaactggagggc
aagatcgctccgcgcgccccgcgtgagggcggacgcgaccggggcccccgacccgaccgc
gaccgccgctga
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