Deinococcus peraridilitoris: Deipe_1009
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Entry
Deipe_1009 CDS
T02381
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dpd
Deinococcus peraridilitoris
Pathway
dpd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Deipe_1009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpd03019
]
Deipe_1009
Messenger RNA biogenesis [BR:
dpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Deipe_1009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KH_KhpA-B
KH_2
UPF0242
Motif
Other DBs
NCBI-ProteinID:
AFZ66573
UniProt:
K9ZY32
LinkDB
All DBs
Position
1033782..1035419
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AA seq
545 aa
AA seq
DB search
MTSMMYAIIGLLIGVAIGGYIAYVRAISRRAQLDDSLKQQAQAEAQVVRESAQQDAGRLR
AEAERVRQDATRLYQEAELREKQSLKERDAVLTETARERESLRAERAETKRDREELKREI
ERLNRRAEQLDARGLKLDALEERLERDHRRIEEELASVAERARAADMRLFEVASLSPEQA
RELILGKLDAELEEEKALRVRAAIDRANVEGKRRAQAIIAQAIQRSASETSAAMSVSVVP
IPSDAMKGRIIGREGRNIRAFEALTGVDLIIDDTPEAVILSSFNPIRREVAKHVLEGLVA
DGRIHPTRIEEMVHKAQDDMKAFIHSQGEDAAIEAGVVGLKPGLLQLLGRMYFRTSYGQN
VLKHSVQVAHLTGILGAELGLDVSMARRAGLLHDVGKSIDREIEGTHVDIGVSLARRFGE
GPEVTDAIAHHHDPENGETLYSVLVAAADAISAARPGARREELESYIKRLEQLEVIATSF
PGVSQAYAIQAGREVRVIVQPEKVTDAQATLLAREIAGRIEQDMEYPGQVQVTVVREQRA
VEYAK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcatgatgtacgcgatcatcgggctcctgatcggtgtggcgattggaggctat
atcgcttatgtgcgcgccatcagccggcgcgcacaactggacgactcgctgaaacagcaa
gcccaggccgaagcccaggttgtgcgcgaaagcgcgcagcaggacgccggccgcttgcgc
gccgaagccgaacgtgtccgccaagatgccacacgactgtatcaggaagccgaactacgc
gaaaaacagtcgctcaaggaacgcgacgccgtactgaccgaaactgcccgggagcgcgaa
agcctgcgcgcagagcgcgcagagaccaagcgcgaccgcgaggagctcaaacgtgaaatc
gagcgcctgaaccgccgcgccgagcagctcgacgcacgcggtctcaagctcgacgccctc
gaggaaaggctggagcgcgaccaccgccgcatcgaagaggagcttgccagcgtcgccgaa
agggcacgcgccgctgacatgcgcctgttcgaggtggccagcctttcacccgagcaggcc
cgtgaactcattctcgggaagctcgacgccgagctcgaagaggaaaaagccctgcgggtg
cgggccgcaatcgaccgcgccaacgtcgaaggcaagcggcgcgcgcaggccatcatcgcg
caggccattcaacgcagcgcctcggagacgagcgcggccatgagcgtgtcggtggtgccg
attccctccgacgccatgaaaggccgcatcatcggccgtgaggggcgcaacatccgcgcc
ttcgaggccctcaccggcgtcgacctgatcatcgacgacaccccggaagcggtgattctc
tcgagcttcaatcccattcgccgcgaggtcgccaagcacgtgctcgaaggtctggtcgcc
gacggacgcatccacccgacgcgcatcgaggagatggtccacaaggcccaggacgacatg
aaggcctttattcacagccagggtgaggacgcggccatcgaggcgggcgtggtgggcctc
aagccgggcctgctgcagttgctgggccgcatgtactttcgcaccagctacgggcagaac
gtgctgaagcacagcgtgcaggttgcgcacctgacgggcatcctgggcgccgaactcggt
ctcgacgtcagcatggcgcgccgtgcgggtctgctgcacgacgtgggcaagagcattgac
cgcgaaatcgagggaacgcacgtggacatcggcgtgagcctggcacggcgtttcggtgag
ggccccgaggtcaccgacgccatcgcccatcaccacgacccggaaaacggcgagacgctg
tacagtgtgctggtcgcggctgccgacgccatcagcgcggcgcgccccggcgcacgccgc
gaggaactcgagtcgtacatcaagcgcctggagcagctggaggtcatcgccacgagcttc
ccgggcgtgtcgcaggcctacgccattcaggccgggcgcgaggtgcgcgtgatcgtgcaa
cccgagaaggtcacggacgcgcaggccaccctgctcgcgcgtgaaattgccggacgcatc
gagcaggacatggaatatccgggccaggtgcaggtgaccgtggtgcgcgagcaacgcgca
gtggagtacgccaagtaa
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