Deinococcus peraridilitoris: Deipe_1125
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Entry
Deipe_1125 CDS
T02381
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dpd
Deinococcus peraridilitoris
Pathway
dpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Deipe_1125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpd02000
]
Deipe_1125
Transporters [BR:
dpd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Deipe_1125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AFZ66684
UniProt:
K9ZZR6
LinkDB
All DBs
Position
complement(1144236..1146026)
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AA seq
596 aa
AA seq
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MRKIVALSALMLGVALAGPRQNNVIIGASQEPPAIQDYWSTNNLAISSEINGYTTSSLTV
KNDAGQLVADLAERVPTAANGDIKTTRQGNRVTSNSVTYRIRPNARWSDGTQITVRDFQF
WLEVQNDERVPVPTREPWNTAKITRVNDKTFTVTFTPAYLFADQVGPGYAPAHIMQADWN
AFKTATAQMDAKSQGKEINERWQQFLGRHTTATGLPKVSSGAFRLTAWRAGSSMTLVRNP
NYWRKPPGDEKNYAQQVIFRFIGDTNTLRVNVLSGQIDALATVGVTFDQGLELQKSEGNR
FKTFFVPGGVWEHIDINKFANVQKVKDLNLDDKRIRQALLMSINRDSLVQQLYQGKQPVS
HSFVSTLSSLYKQDVQKYPYNPDRAKQLFAAAGWTPGSDGILQKDGKKFQINFTTTAGNR
IRERVQQILIAQWKAVGVDVQVANQPASVVFSEDFIQRASEGRWDMFMFAWVQDPALETG
NLYSAETQNGDPNIPTSANGYAGQNIGGWNNAEFNGLYKQALQAFEAAPRKTFFDRMQTI
WAEEIPTIPLYNRANPYTKATGLVNYTFSASNLYPSWNAYQIGWSQNGAREVNVQR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatcgtagccctttcggcccttatgctcggcgtggcgctggctggtccccgc
cagaacaacgtgatcattggcgcgtcccaggagcctcctgccattcaggactactggagc
accaacaacctcgccatttcttcggaaatcaacgggtacaccacatccagcctgaccgtc
aaaaacgacgcaggccagctggtcgccgacctggccgagcgtgttccgacggctgcaaac
ggggacatcaagaccacccgccagggaaaccgggtgaccagcaactcggttacctaccgc
attcggcccaacgcgcgctggtccgacggaacgcagatcaccgtgcgcgactttcagttc
tggctggaagtgcaaaacgacgagcgtgtgccggtgccgacccgcgaaccctggaacacc
gccaagatcacgcgcgtcaacgacaagacctttaccgtcaccttcacccccgcctacctc
ttcgccgatcaggtcggccccggatacgccccggcccacatcatgcaggccgactggaac
gctttcaagaccgccacggcgcagatggacgccaagagccaggggaaagagatcaacgag
cgctggcagcagtttctcggtcgccacactacggccaccggtctgcccaaggtgtcgagc
ggggctttccgcctgaccgcctggcgggcaggttccagcatgaccctcgtgcgcaatccg
aactactggcgcaagccgccgggtgatgagaagaactacgcgcagcaggtcatcttccgc
ttcatcggcgataccaacaccctgcgcgtgaacgtgctgtccggtcagatcgatgcgctg
gccactgtcggcgtcaccttcgatcagggcctggaactccagaagtcggaaggcaaccgc
ttcaagaccttcttcgtaccgggcggtgtgtgggagcacatcgacatcaacaagttcgcg
aacgtccagaaagtcaaggacctgaacctcgacgacaagcgcattcgccaggccctgctg
atgtccatcaaccgtgattctctcgtgcagcagctctatcagggcaagcagccggtcagc
cacagctttgtgagcacgctgagctcgctctacaagcaggacgtacaaaagtacccctac
aaccccgaccgtgccaagcaactcttcgctgcagccggctggaccccgggctctgacggc
atcctgcagaaggacggcaagaagttccagatcaacttcaccaccactgccggtaaccgc
atccgcgagcgcgtccagcagatcctgatcgcgcagtggaaggctgtcggcgtggacgtg
caggtcgccaaccagcctgcctcggtggtcttctcggaagacttcattcagcgggccagc
gaaggccgttgggacatgttcatgttcgcctgggtgcaggatccggcgctggaaactggc
aacctgtattcggccgagacgcagaatggagaccccaacatccccacctctgccaacggg
tacgcgggccagaatattggtggctggaacaacgccgagttcaacggtctctacaaacag
gccctgcaggcctttgaggcagcgccccgcaagacgttctttgaccgcatgcagacgatc
tgggcggaagagattcccaccattcccctgtacaaccgtgctaacccgtacaccaaggcg
accgggctcgtgaactacaccttctcggcttcgaacctgtaccccagctggaatgcttac
cagatcggctggtcgcagaacggcgcccgtgaagtgaacgtgcagcgctga
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