Deinococcus peraridilitoris: Deipe_1249
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Entry
Deipe_1249 CDS
T02381
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
dpd
Deinococcus peraridilitoris
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Deipe_1249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpd03021
]
Deipe_1249
Transcription machinery [BR:
dpd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Deipe_1249
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
AFZ66799
UniProt:
L0A022
LinkDB
All DBs
Position
complement(1265926..1267395)
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AA seq
489 aa
AA seq
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MSEADTRKTRTRAASEGKAKPARTKTPSDGAAKKSAAPKTPKAPKASAAKAAAKTAVAET
GDAKTAPVKGKAAGSAKADGGDKALYQHAAVQTLIKTGKAAGSVTSEAVATALNAALEEA
GLDPDQEGSFEDLQLFLNAQQIEIQDLDDDLDEDEEDELDEDKPDASAEEEEEEREYDDV
PRAVSNDPVRQYLHEIGRVPLLTLAEEISLARRIEEGEEARAKLEADLDLDDRARRSLQR
QVEDGQAARQGLIEANLRLVVSIAKKYSNRGMGFLDLIQEGNQGLIRAVEKFEYRRGYKF
STYATWWIRQAVNRAIADQARTIRVPVHMVETINKLSRTARQLQQELSRDATNEEIAEAM
GPGWEAAKVEEIQKITLEPVSLEAPVGTEGDSFYGDFIPDENFDSPAENTDRTMLSEELE
KALDKLNEREAMVLRLRKGLVDGREHTLEEVGQYFNVTRERIRQIENKALRKLKYQESRS
RKLRDFLLD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagctgatacccgaaaaaccagaacgcgcgccgcgagtgaaggcaaagccaaa
ccggccagaaccaagacgccttcggacggcgccgcgaaaaagagcgcggcgcccaaaact
cccaaagcgcccaaagccagtgctgccaaagcggcagccaaaacggccgtggccgaaaca
ggtgacgcgaagactgcgccggtcaaaggcaaggcggccggcagcgccaaagccgatggg
ggagacaaggcgctctaccagcacgccgccgtgcagacgctgatcaagacgggcaaggcc
gccggctccgtgacgagtgaggccgtggcgaccgcactcaacgccgcactggaggaagcc
ggactcgaccctgaccaggaaggcagcttcgaggacctgcaacttttcctcaacgcgcag
cagatcgagattcaggatctcgacgacgacctcgacgaggacgaggaagacgaactcgat
gaagacaaacccgacgcttctgccgaagaggaagaagaagagcgcgagtacgacgacgta
ccgcgtgcggtcagcaacgacccggtgcgccagtacctgcacgagatcggccgcgttccc
ctgctgaccctggccgaggaaatcagcctcgcgcggcgcatcgaggaaggtgaggaagcc
cgcgccaagctcgaagccgaccttgacctcgacgaccgcgcccggcgctcgctgcaacgc
caggtcgaggatggtcaggcggcccgtcagggcctgatcgaggccaacctgcgcctggtg
gtcagcatcgccaagaagtactccaaccggggcatgggctttctcgacctaattcaggaa
ggcaaccagggcctgattcgcgcggtcgagaagttcgagtaccgccgcggttacaagttt
tccacctacgccacctggtggatccgtcaggccgtcaaccgcgcgattgccgatcaggcg
cgcaccattcgcgtgccagtgcacatggtcgagaccatcaacaagctgagccgcacggcc
cgccagctgcagcaggaactgtcgcgcgacgccaccaacgaggaaattgccgaggcgatg
ggccctggctgggaagccgccaaggtcgaggaaatccagaagatcaccctggagcccgta
tcgctcgaagcgcccgtcgggaccgagggtgacagcttctacggcgacttcattcccgac
gagaacttcgactccccggccgagaacaccgaccgcaccatgctgagcgaggaactggaa
aaggccctcgacaagctcaacgagcgcgaagcgatggtgttgcgcctgcgcaaaggactc
gttgacggccgcgagcacaccctcgaagaggttggccagtacttcaacgttacccgcgag
cgtatccggcagatcgagaacaaggcgctgcgcaagctcaagtaccaggaaagccgcagc
cgcaagctgcgtgacttcctgctcgactga
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