Deinococcus peraridilitoris: Deipe_1265
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Entry
Deipe_1265 CDS
T02381
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dpd
Deinococcus peraridilitoris
Pathway
dpd03030
DNA replication
dpd03430
Mismatch repair
dpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Deipe_1265
03430 Mismatch repair
Deipe_1265
03440 Homologous recombination
Deipe_1265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpd03032
]
Deipe_1265
03400 DNA repair and recombination proteins [BR:
dpd03400
]
Deipe_1265
Enzymes [BR:
dpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Deipe_1265
DNA replication proteins [BR:
dpd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Deipe_1265
DNA repair and recombination proteins [BR:
dpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Deipe_1265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFZ66815
UniProt:
L0A1C0
LinkDB
All DBs
Position
complement(1282512..1283078)
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AA seq
188 aa
AA seq
DB search
MLAGCSSVWGMEYVVFDLETTGLSPEKDAIIEIGAMYVRDGELIEAPLFHALVNPEREIP
WYASRVHGIRNAHVAGAPKLAEVLPAFLDFVGDRAVVAHNIGFDAGFMRMATRRHGLLWT
PREEICTVQLSRRAFPRERSHKLDLLASRFGLSFEEGGRHRSLGDVRVTAQAFLALQAQL
GLHVHNAR
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgccggatgctctagtgtgtggggcatggagtacgtggtgtttgatctcgaaacg
accggtctttcgccggaaaaagatgccatcatcgagatcggcgcaatgtacgtgcgtgat
ggggagctgatcgaggcacctttatttcacgcgctggtcaatcccgagcgcgagattccc
tggtatgcgtcccgtgtgcatggcatccgcaatgctcacgtggcaggtgcaccgaagctg
gccgaggtgctgcctgcttttctggattttgtgggtgaccgcgcggtcgtggcccacaat
atcggtttcgacgcggggttcatgcggatggcgacccggcgtcatggtcttttgtggacg
ccacgcgaggaaatctgcaccgttcagctttcccggcgtgcttttccgcgtgaacgcagt
cataagctcgatctgctcgcgagccgctttggtctgtccttcgaagagggtggccgccac
cgaagtctgggcgacgtgcgggtgacggcgcaggcgttcttggcgctgcaggcccagctg
ggtttgcatgtgcacaacgctcggtaa
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