KEGG   Deinococcus peraridilitoris: Deipe_1722
Entry
Deipe_1722        CDS       T02381                                 
Name
(GenBank) Excinuclease ATPase subunit
  KO
K03701  excinuclease ABC subunit A
Organism
dpd  Deinococcus peraridilitoris
Pathway
dpd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dpd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Deipe_1722
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dpd03400]
    Deipe_1722
DNA repair and recombination proteins [BR:dpd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Deipe_1722
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Deipe_1722
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 AAA_29 nSTAND1 AAA_25 DnaJ_CXXCXGXG AAA_33 RsgA_GTPase AAA_15 AAA_16 SMC_N ATPase Viral_helicase1 MeaB cobW NB-ARC MutS_V
Other DBs
NCBI-ProteinID: AFZ67243
UniProt: L0A033
LinkDB
Position
1716226..1718742
AA seq 838 aa
MTFSPESSGFVQVRGAREHNLKDISVSIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRY
LESVSPYARRLFHQVGAPNVDAIHGLPPAVALQQQRGAPTARSSVGSVTTLSNLLRMLYS
RAGEYPEGQEIVYAEGFSPNTPEGACPGCHGLGHVYEVTEASMVPDPSLTIRERAVAAWP
QAWGGQNQRDILVTLGIDVDVPWRDLPQSTRDWILFTDEQPVVPVYPGLTPEETRQAAER
KLSPSYMGTFSSARRHVMHTFAHSESAAMRRRVQRYMIATQCLVCHGKRLRHEALAVTFA
GYDITEFSRLPLKQVAELLRPYVEGKERGHTQRADRHPEQVIAQRRMAEDLAARLEVLLN
LGLGYLQLERSTPTLSPGELQRLRLGTQLYSNLFGVVYVLDEPSAGLHPADTEALLAALD
GLKVAGNSLFVVEHDLNVIRRADWLVDVGPAAGEQGGEILYSGPPKGLRKVTTSQTARYL
FREERAELHEPRAPSGWLELSRVTRNNLSKLSVRFPLGVLTAVTGVSGSGKSTLVSQVLV
DTLMAHFGQKVISEDEEDAEDTSPVTVAQLGGNLASLARLVRVDQKPIGRTPRSNMATYT
GLLDHVRKLFAATPLAKKRKYSAGRFSFNVKGGRCEHCQGEGWVMVELLFLPSVYAPCPV
CHGARYDATTLEVEYQGKNIAEVLGMTVDTAWDFFRDDPLVFRTLNTLREVGLSYLRLGQ
PATELSGGEAQRIKLATELQRNGRGTSIYVLDEPTTGLHPADVQLLIRQLTRLVDTGNTV
ITVEHDMQVVASSDWVIDIGPGAGDEGGQIVAQGTPREVAQARRSRTAPYLAQALGID
NT seq 2517 nt   +upstreamnt  +downstreamnt
atgacgttctctcccgagtcttccggcttcgtgcaggtgcgtggtgcgcgggaacacaac
ctcaaggacatctccgtgagcattccacgtgacgccctggtggtgttcaccggagtgtcc
gggtcagggaaatcctccctggcctttggaacgctgtatgccgaggcacaacggcgttat
ctcgaatccgtctcaccttacgcccggcgcctgtttcatcaggtgggcgcaccgaacgtg
gacgccattcatggcctgcctcctgccgtcgccttgcaacagcaacgtggtgcaccaact
gcccgctcctcggtggggagtgtcaccaccctgtcaaacctgctgcggatgctgtattcc
cgtgcgggggagtacccggaagggcaggagatcgtgtacgccgaggggttctcacccaac
accccggaaggagcctgcccggggtgtcacggtctcggccacgtctatgaagtgacggag
gcttcgatggttcctgatccgtcactcaccatccgcgagcgggccgtggcggcctggccg
caagcctggggcggacagaatcaacgcgacatcctggtaacgctcggcatcgacgtggac
gtgccctggcgggacctgccgcagtcgacgcgggactggattctgttcacggacgagcaa
ccagtcgtgccggtgtaccccggcctgactcctgaagaaacccggcaggctgccgaacgc
aagctttcacccagctacatgggcacgttcagcagcgcccggcggcacgtcatgcatacc
ttcgcgcacagcgagagcgcggcgatgaggcggcgcgtgcagcgctacatgatcgctaca
caatgcctggtctgtcacgggaagcgactgcggcacgaagccctggcggtcacgtttgcg
ggctatgacatcactgaattctcgcgcctgccgctcaagcaggtggccgagctcctgcgc
ccgtacgtcgaaggaaaggagcgcggccacacccagcgcgccgaccgtcatcccgagcag
gtcatcgcgcagagacgcatggccgaggatctggccgcccgcctcgaggtgctgctcaac
cttgggctgggctatctgcagcttgaacgttcgacgccgaccctttcgcccggggagttg
cagcgcctgcgcctcgggacacagctgtactccaatctgttcggcgtcgtctatgtcctt
gatgaaccgtcggcgggactgcatccggcggatacggaagcgctgctcgcggcgctggac
ggcctgaaagttgccggaaactccttgttcgtcgtcgagcacgatctgaacgtcattcgg
cgggcggactggctggtcgacgtggggcccgccgcaggggagcagggcggtgaaattctc
tacagcggaccgccaaagggcttgcgcaaagtgacgacatcccagactgcccggtacctc
tttcgggaggaacgtgctgaactacacgagccccgcgcaccttccggctggctggaactg
agcagggtgacacgcaacaacctgagcaagctcagtgtccgctttccactcggcgtgctg
actgccgttacgggtgtctcgggctcaggcaaatcgacgctggtgagtcaggtgctggtc
gataccctgatggcacacttcggtcagaaagtcatatcagaggacgaggaggacgccgaa
gacacctcaccggtgaccgtcgcgcagcttggcgggaacctggcctctctcgctcgtctg
gtcagggtggatcaaaagccgatcggtcgaacgccgagaagcaacatggccacgtacacc
ggtctgttggatcacgtccgcaagctgttcgcggccactccacttgcgaagaagcgcaag
tacagcgctggccgcttctccttcaacgtgaagggtggccgctgcgagcactgtcagggt
gaaggctgggtcatggtggaactgctgttcctgccgagcgtatatgcaccgtgcccggtc
tgccacggggcacgctatgacgccacgacccttgaagtcgagtaccagggcaaaaacatc
gcggaggtactcggcatgacggtggacaccgcctgggattttttcagagacgacccgttg
gtcttccggacactcaacaccctccgcgaggtggggctaagttacctgcggctcgggcag
cccgcgacagaactctccggtggtgaagcgcagcgcatcaagctcgccacggagttgcag
cgcaacggtcggggtacgagcatctatgtcctggacgagccaaccaccggacttcacccc
gctgacgtgcaactcctgatccgccagcttactcggctggtcgacacggggaacacggtc
atcaccgtcgaacatgacatgcaggtggtggccagcagcgactgggtgattgacatcggc
cccggagccggtgacgaaggcgggcagatcgtcgcgcagggaacaccgcgggaagtggcg
caggcgcgacgaagccgcactgccccctacctggctcaggccctcggtattgattga

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