Deinococcus peraridilitoris: Deipe_2008
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Entry
Deipe_2008 CDS
T02381
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dpd
Deinococcus peraridilitoris
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpd03016
]
Deipe_2008
Enzymes [BR:
dpd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Deipe_2008
Transfer RNA biogenesis [BR:
dpd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Deipe_2008
Prokaryotic type
Deipe_2008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AFZ67505
UniProt:
L0A3B8
LinkDB
All DBs
Position
complement(2005867..2006700)
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AA seq
277 aa
AA seq
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MRRKPQHVPVCFKLQRVQDTLADSFYAPPPGYGRVRLDVQWDGRDFVGWQSQARGRSVQD
TLHAALSHLGDARRPVAAGRTDAGVHALCMPTHVDVVDGTLRTSIERLPWALNALLPRDL
VVLGASAAPGFHARFSCRQRAYVYRLLRAPHRAPLEEGRALHVARALDVAAMRMAGTHFV
GRHDFAALATRDERQSVREIHELVLVEHGSLLEVHVRGESFLRHMVRALVGTLLLVGEGK
LVPDDVPEILARRDRKLAGRNVAPHGLYFAGARYSNS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcaagccacaacacgtcccggtgtgctttaagctacagcgcgtgcaggacact
cttgcggattctttctatgccccgccgccaggctacggccgcgtgcggctcgacgtgcag
tgggacgggcgggacttcgtcggctggcagagccaggcccgtgggcgcagcgttcaggat
accctgcatgccgccctgagccacctgggcgacgcgcggcggcccgtcgcggccggacgg
actgacgcgggcgtacacgcgctgtgcatgcccacccatgtcgacgtagtggatggcacg
ctgcgcaccagcatagagcgcctgccctgggcactcaatgccctgttgccgcgggatttg
gtggtcctgggtgccagcgcggcaccaggttttcacgcgcgcttctcctgccggcagcgc
gcctacgtgtatcggctgctgcgcgcaccacaccgcgctcccctggaggaagggcgggcg
ctgcatgtcgcgcgcgccctggatgtggcggccatgcggatggcgggcacgcactttgtc
ggtcgccacgacttcgccgccctcgcgacgcgagacgagcgtcagagcgtgcgcgaaatc
catgagcttgtgctggtagagcacggatcacttctcgaggtgcacgtgcggggcgaaagc
tttctgcgccatatggtccgcgcgctcgtgggaaccctgctgctggtcggcgagggaaag
ctggtgccagacgatgtccctgagattctggcgcgccgtgaccggaagctggccggacgc
aacgtcgcccctcacggcttgtactttgcaggtgcccgctattcgaattcgtga
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