Deinococcus peraridilitoris: Deipe_2243
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Entry
Deipe_2243 CDS
T02381
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dpd
Deinococcus peraridilitoris
Pathway
dpd03030
DNA replication
dpd03430
Mismatch repair
dpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Deipe_2243
03430 Mismatch repair
Deipe_2243
03440 Homologous recombination
Deipe_2243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpd03032
]
Deipe_2243
03400 DNA repair and recombination proteins [BR:
dpd03400
]
Deipe_2243
Enzymes [BR:
dpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Deipe_2243
DNA replication proteins [BR:
dpd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Deipe_2243
DNA repair and recombination proteins [BR:
dpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Deipe_2243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AFZ67727
UniProt:
L0A3H5
LinkDB
All DBs
Position
complement(2233449..2237543)
Genome browser
AA seq
1364 aa
AA seq
DB search
MTAAPDPTAPPSKDEGRLDHHIHTPDGSCCAHNGSPADAPRIRKFAHLHQHTQYSLLDGA
AKLKDLLKWVKQVTPNDPACAITDHGNMHGSVHFYNYALQMGVKPILGYEAYVAAGSRFD
RKPGESGEKGTFHLTLLARDFEGYQNLCRLTSAGYLEGYYYKPRIDRELLKEYSKGVIAL
SGCLGAEVPQFILQDRLEDARARLLWYQSVFKDNYFIEVQDHGLPEDKKVMDVLREWARE
LGIGMAATNDGHYVKKDDALAHETLLAIQTKATMADEKRFKFPCDEFYVKSLEEMQTSMP
VEVWGEEPFDNTAHIASLCNVDLPVGKKRVYQMPALPIPEGRTMSEELRVQTYRGSVKRY
ARHLTESFLRRYAARSWQKVQDAPALRAYYDAIYAPKIDGEKCSAEKFAAIDFAAHGARL
RARLPNFDANTADPETLYTALAFMGSVWEELGKACDEKYTKYPALEELEAEREASDTEAG
SVLDGMDRGASGHGEALDEATYRHALVLMRRAEYELSVINNMGFPDYFLIVADYINWAKD
QGISVGPGRGSGAGSLVAYAIRITNLDPLEYGLLFERFLNPDRVSMPDFDIDFSDARREE
VIQYVRRKYGDDKVAQIATFGTMASKACLKDVARVMSLPYGDVDKVSKLIPIKFGKSYSL
EEARESVPDIQEMLRANKELEEAYNFAQKLEGLTRHASVHAAGVVIGKTQLTDLVPLMRD
TSGEGVVCQFDMKAVEDIGLIKMDFLGLRTLSFLEEAHRILKESKGLSVNFDEIPLDDEA
TFELLSRGDTKGVFQLEGAGIADASRRLKPRRLADIIALSALYRPGPMENIPTYVRRHHG
VEDVDYVKDGFPNSQQWLEKILKETYGIPVYQEQIMQIASEVAGYSLGGADLLRRAMGKK
DAEEMKRQRQLFITGSKDNGIPADEANRLFDLLEAFANYGFNKSHSAAYGVITYQTAWLK
ANHPVEFMAALLTVERRDSDKVAEYASDARKMGVSVLPPDINRSGADFKVEGEEIYFGLF
AIKGLGENAVLKILEERERGGKYTSLADFCKRVDSKTCNRRGLESLVKAGAFDAFGERKQ
LLECLDEAVSWAQGAAKVMNSGMDSLFGAAEVAPEPKLKPGVEPLSELEKLSLEKEALGL
YISGHPLEQHEGLREAATCRIADLETWFQSQGAKGRVKAVLAGMVENVVKKPTKSGGMMA
RFNLADESATIELVTFSRGYERMQEKLINDTPCLVIVEIESEDGGLRCIAEELVTVEALA
DVPKVMYVDIDLDVASPDDLGDFQSYLDEHAGSLPTFFKFVSGEHFVVYQLDKGIGSHEA
MRVVNQTFGWAEAYLAYDNASILSRYAPKPPAWQQRAGQKSVQA
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcccccgacccaacggctccaccctccaaggacgaggggcgcctcgaccac
catatccacacccccgacgggagctgctgcgcacacaacggctcgcctgcggacgcgccc
cgaatccgcaagttcgcgcacctgcaccagcacacccagtattccctgctcgacggcgcg
gcgaagctcaaggacctcttgaagtgggtcaagcaggtcaccccgaacgatccggcctgc
gccatcaccgaccacggcaacatgcacggctcggtgcacttttacaactacgccctccag
atgggcgtcaagcccattctgggctacgaagcctacgtcgcggccgggtcacgctttgac
cgcaagcccggcgaaagcggcgagaagggcacctttcacctcaccctgctcgcgcgcgac
ttcgaaggctaccagaacctctgccgcctgacctcggccgggtatctggaggggtattac
tacaagccgcgcattgaccgcgaactgctcaaggagtacagcaagggcgtgatcgccctc
tcgggctgcctgggggccgaggtgccgcagttcatcttgcaagaccgcctggaagacgcc
agggcgaggctgctgtggtaccagagcgtgttcaaggacaactacttcatcgaggtgcag
gaccacggtctgcccgaagacaagaaggtcatggacgtgctgcgcgagtgggcgcgcgaa
ctgggcatcggcatggcggccaccaacgacgggcactatgtcaagaaagacgacgccctg
gcgcacgaaacgctgctcgccatccagaccaaggccaccatggccgacgagaagcgcttc
aagtttccctgcgacgagttctacgtcaagagcctggaggagatgcagacctccatgccc
gtcgaggtctggggcgaggaacccttcgacaacaccgcccatatcgccagcctgtgcaac
gtggacctgccggtcggcaagaaacgggtctaccagatgcccgccctgccgattcccgag
ggccgcacaatgtccgaggaactgcgcgtccagacctaccgcggcagcgtaaaacgctac
gcccggcacctgaccgaaagcttcctgcggcgctacgccgcgcggtcctggcagaaggtg
caggacgccccggccctgcgcgcgtattacgacgcgatctacgcccccaagatcgacggc
gagaaatgcagcgccgagaagtttgccgccatcgacttcgccgcgcacggcgcaaggctg
cgcgcgcgattgccgaacttcgacgcgaacaccgccgaccccgaaaccctctacaccgcg
ctggccttcatgggcagcgtgtgggaggaactcggcaaggcctgcgacgagaagtacacc
aaataccccgcgctcgaagagctcgaggccgagcgcgaagcgtccgatacagaggcaggt
tccgtgctcgacggcatggatcgaggcgcgtccgggcacggcgaggcgctcgacgaggcc
acctaccggcatgccctggtcctgatgcgccgcgccgagtacgaactgtcggtcatcaac
aacatgggctttccggattacttcctgatcgtcgccgactacatcaactgggccaaggac
cagggcatcagtgtgggaccgggccgtggctcgggtgccggcagcctcgtcgcgtacgcc
attcgcatcaccaacctcgatccgctggagtacgggctgctcttcgagcgctttctgaac
cccgaccgtgtctcgatgccggacttcgacatcgacttcagcgacgcccgccgggaagag
gtcattcagtacgtgcgccgcaagtacggcgacgacaaggtcgcgcagatcgccaccttc
ggaacgatggcgtccaaagcctgcctcaaggacgtcgcgcgcgtcatgagccttccctac
ggcgacgtggacaaggtcagcaagctgattcccatcaaattcggcaaaagctactccctc
gaggaagcgcgcgaaagtgtcccggacatccaggagatgctgagggccaacaaggagctc
gaggaagcctacaacttcgcccagaagctcgaagggctcacgcgccacgccagcgtgcac
gcggccggggtggtgatcggcaagacccagctcaccgacctcgtgcccctgatgcgcgac
accagcggtgagggtgtggtctgtcagttcgacatgaaggccgtcgaggacatcggcctg
atcaagatggacttcctgggcctgcgcacgctgtcctttctggaagaagcccaccgcatc
ctgaaagagtccaagggcctcagcgtcaacttcgacgagattcccctcgacgacgaggcg
accttcgagctgctgtcgcgcggggacaccaagggcgtcttccagctggaaggcgcgggc
atcgccgacgcctcacgacgcctcaagccaaggcgtctggccgacatcatcgcgctctcg
gccctctaccgccccggcccgatggagaacattcccacctacgtgcgccgtcaccacggg
gtcgaggacgtcgattacgtcaaggacggcttcccaaacagccagcagtggctggagaag
atcctcaaggaaacctacggcattcccgtctaccaggagcagatcatgcagatcgcctcg
gaagtggccgggtactccctggggggcgccgacctgctgcggcgcgccatgggcaagaaa
gacgccgaggaaatgaagcgccagcgccagctcttcatcaccggcagcaaggacaacggg
attccggccgatgaagccaaccggctgttcgatctgctcgaggcctttgcgaactacggc
ttcaacaagagtcactcggccgcctacggcgtcatcacctaccagacggcgtggctcaag
gccaaccacccggtggagttcatggccgccctgctcacggtggagcggcgcgattcggac
aaggtggccgagtacgcctcggacgcccgcaagatgggcgtctcggtgctgccccccgac
atcaaccgctcgggcgccgacttcaaggtcgagggcgaggaaatctacttcgggctcttc
gccatcaagggcctcggggaaaacgccgtactgaagattctcgaagagcgcgagcgcggc
gggaagtacacctcgcttgcggatttctgcaagcgggtcgacagcaagacctgcaaccgg
cgtggcctggaatctctcgtgaaagcgggcgccttcgacgccttcggagaaagaaagcag
cttctcgagtgcctcgacgaggcggtgagctgggcgcagggtgcggcgaaggtcatgaac
tctggcatggactcgctcttcggcgcggccgaggtggcgccggagccgaaactgaaaccc
ggcgtcgaaccgctcagcgaactcgagaagctctcgctggaaaaagaagccctgggcctc
tacatcagcgggcacccgctggagcagcatgaagggctgcgcgaagccgccacctgccgc
atcgcggacctggagacctggtttcagtcgcagggcgccaagggccgggtgaaggccgtg
ctggcgggcatggtggaaaacgtcgtgaagaagcccaccaagtcggggggcatgatggcg
cgcttcaacctggccgacgagtccgcgaccatcgaactggtgaccttttcgcgcgggtac
gagcgcatgcaggaaaagctgatcaacgacacgccctgcctcgtgatcgtggagatcgaa
agcgaggacggcggtctgcgctgtatcgccgaggaactggtgaccgtagaggcgctcgcg
gacgtgcccaaggtcatgtacgtcgacatcgacctcgacgtggccagcccggacgacctg
ggcgactttcagagttacctcgacgagcacgcgggcagcctgccgaccttcttcaagttc
gtgtccggcgagcacttcgtggtgtaccagctcgacaagggcatcggcagccacgaggcc
atgcgggtggtgaaccagaccttcggctgggccgaagcttatctcgcctacgacaacgcc
tcgatcctgtcgcgctacgcgcccaaaccgcccgcctggcagcagcgcgccgggcagaaa
agcgtgcaggcgtaa
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