Deinococcus peraridilitoris: Deipe_2248
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Entry
Deipe_2248 CDS
T02381
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
dpd
Deinococcus peraridilitoris
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpd03032
]
Deipe_2248
03036 Chromosome and associated proteins [BR:
dpd03036
]
Deipe_2248
03400 DNA repair and recombination proteins [BR:
dpd03400
]
Deipe_2248
DNA replication proteins [BR:
dpd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Deipe_2248
Chromosome and associated proteins [BR:
dpd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Deipe_2248
DNA repair and recombination proteins [BR:
dpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Deipe_2248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HTH_NPRL3
HU-DNA_bdg
DUF3791
Motif
Other DBs
NCBI-ProteinID:
AFZ67732
UniProt:
L0A3I0
LinkDB
All DBs
Position
complement(2241475..2241834)
Genome browser
AA seq
119 aa
AA seq
DB search
MTKSSKAKTSKAAPKAAAAPAAPAKAESTKLGKTHIVEAIADKAGLSKKQAAEVFDAFGD
IVVDALKGGKSVGLPGLGTFSVTSTAERQGVRPGTSERITIPAGKKVRFKIASNLKGNL
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagagcagcaaagccaagaccagcaaggccgcccccaaagccgccgctgccccc
gccgctccggcgaaagccgaaagcaccaagctcggcaagacccacatcgtggaagccatc
gccgacaaggccggcctctccaaaaagcaggctgccgaagtgttcgacgcttttggtgac
atcgtcgtggacgccctcaagggtggcaagagcgtcggtctgcccggcctgggcactttc
agcgtgaccagcaccgccgagcgtcagggcgtgcgccccggcaccagcgagcgcatcacc
attcccgccggcaagaaagtccgtttcaagatcgccagcaacctcaagggcaacctctaa
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