Deinococcus peraridilitoris: Deipe_2503
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Entry
Deipe_2503 CDS
T02381
Name
(GenBank) topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dpd
Deinococcus peraridilitoris
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpd03032
]
Deipe_2503
03400 DNA repair and recombination proteins [BR:
dpd03400
]
Deipe_2503
Enzymes [BR:
dpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Deipe_2503
DNA replication proteins [BR:
dpd03032
]
Prokaryotic type
DNA Topoisomerases
Deipe_2503
DNA repair and recombination proteins [BR:
dpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Deipe_2503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
T3SS_ExsE
Motif
Other DBs
NCBI-ProteinID:
AFZ67971
UniProt:
L0A292
LinkDB
All DBs
Position
complement(2510616..2511671)
Genome browser
AA seq
351 aa
AA seq
DB search
MTSRTELLQDEYLRREGSKVDEFRYFYPDGTELTDQAALARIARLAVPPAYQEVFVSPDP
DAELQAFGRDAAGRLQYRYHPDFLQAGALRKWQRLARFAFALPQLRQLTTADLRRAELPP
RKVLALMTRLLYVAHFRVGSDAYATRHKTYGLSTLHKRHVKVVGNTVEFHFKGKHGIWQH
KALTDRTLAANIEKLLALPGRFLFQARGEQGVTRVRSAELNAYIRELIGPFTAKDFRTWG
GTLLAGEYLAEAGVAASEREARKTVVECVKVVAADLGNTPAVVRAHYICPVIFDRYFEGR
ILDDFEPRSSRGVNALEGLSRSELALQRMLDAEHRPDGRPRRAARTPSKAA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgacttcacgcaccgaactgctgcaagacgagtacctgcgccgcgaaggcagcaaggtg
gacgagtttcgatacttctatcccgacggcaccgaactgaccgatcaagcggcgctggcg
cgaattgccaggctggccgtaccacccgcttatcaggaggtgttcgtctcgccggatccg
gacgccgaattgcaggccttcgggcgtgacgcggccggacgcctgcagtaccgctatcat
ccggactttctgcaggcaggcgcgctgcgcaaatggcaacgcctggcgcgcttcgctttc
gcgctgccccagctgcgccaactcaccaccgccgatctgcggcgcgcagaactgcctccg
cgcaaggtgctggccttgatgacccgcctgctgtacgtggcgcacttccgggtaggctcg
gacgcctacgcgacgcggcacaagacctacggcctttcgacgctgcacaagcgtcatgtc
aaggtggtgggcaacaccgtcgagtttcatttcaagggcaagcacggcatctggcagcac
aaggcgctcaccgatcgcacgctggcagccaacatcgagaagctgctggctttgcccggc
cgctttttgtttcaggcccgcggcgagcaaggggtgacgcgagtgcgttcagcagaactc
aacgcctacatccgagaactgatcgggccttttaccgccaaggacttccgcacctggggt
ggtacactgctggccggtgaatatctggcagaagccggagtggccgccagcgaacgtgaa
gcccgcaaaacggtggtggagtgcgtgaaagtcgtggcggccgatctgggcaacacaccg
gccgtggtgcgcgcacactacatctgcccggtcatcttcgatcgttatttcgaaggtcgg
attctcgatgacttcgagcctcgctcctcacggggtgtcaacgcgctggaggggctgtca
cgctccgagctcgccttacagcggatgctcgacgccgagcaccgaccggacggccgccca
cgtcgcgcggccaggaccccgtccaaagcggcctga
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