Deinococcus peraridilitoris: Deipe_2994
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Entry
Deipe_2994 CDS
T02381
Name
(GenBank) HhH-GPD superfamily base excision DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dpd
Deinococcus peraridilitoris
Pathway
dpd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Deipe_2994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpd03400
]
Deipe_2994
Enzymes [BR:
dpd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Deipe_2994
DNA repair and recombination proteins [BR:
dpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Deipe_2994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH_5
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AFZ68445
UniProt:
L0A5Z8
LinkDB
All DBs
Position
complement(3015999..3016622)
Genome browser
AA seq
207 aa
AA seq
DB search
MSDFDLSAGLAHLQRDPVLAALLLRADATPGVQPWWPPPERGTPFAALIRSVVGQQVSVK
AAASIEGRLREVAPSLSPHELVSLSPEELRARGLSWAKVRTVHTLAQRAAEGLLDFEALS
RSDDETVIEALSAVPGIGRWTAEMFLMFALRRPDVFSWGDAGLRKAVRTLYGPASGPEVA
QKWSPYRSVAARLLWWSLHNEPQRKET
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttcgatctgtctgccggtctggcgcacctgcagcgtgacccggtgctggcc
gccttgctgctgcgtgccgacgcaacgcccggcgtgcagccgtggtggccgccacccgag
cggggaacgccgttcgcagcgctgatccgctcggtcgtcggtcagcaggtgtcggtcaag
gcggcggccagcatcgagggacggctgcgcgaagtggcgccgtctctgagcccgcacgag
ctggtctcactgtctccggaagagctgcgcgcgcgaggtctgtcgtgggccaaagtacgc
acggttcacaccctcgctcaacgggcagccgaaggcctgctggacttcgaagccctgtcg
cgcagcgacgacgagaccgtgatcgaggccctgtccgccgttcccggcattggacgctgg
acagccgagatgttcctgatgttcgcgctccggcgccctgacgttttttcctggggagac
gcgggtctgcgcaaggccgtgaggaccctgtacggaccggcctccgggccggaagtggcg
cagaagtggagcccttaccgctcggtggccgcgcgtctgttgtggtggtcactgcacaac
gaaccgcagcgcaaggaaacataa
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