Deinococcus peraridilitoris: Deipe_3076
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Entry
Deipe_3076 CDS
T02381
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dpd
Deinococcus peraridilitoris
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpd03009
]
Deipe_3076
Enzymes [BR:
dpd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Deipe_3076
Ribosome biogenesis [BR:
dpd03009
]
Prokaryotic type
ribosomal protein modification factors
Deipe_3076
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AFZ68525
UniProt:
L0A679
LinkDB
All DBs
Position
3080312..3081748
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AA seq
478 aa
AA seq
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MLACMTVSGEPQVNAKKVGFISLGCPKALVDSERILTQLRAEGYHIAPTYEEADTVIVNT
CGFITPAVEESLSAIGEALDATGRVIVTGCLGERPETIRERHPKVAAITGSQDVEGVMSA
IHELLPPDQNPFTSLIPGMSGGEVKLTPRHYSYLKIAEGCNHKCAFCIIPKLRGLQASRD
AGEVLYEAFRLIASGTRELMVISQDTSAYGIDVRYRESEFQGKQVRAHLLDLAVKLGEMG
AWVRMHYVYPYPHVDEIVKLMAQGKILPYLDVPLQHASPEVLRRMRRPGAGRQLDTIRRW
REICPDLTIRSTFIVGFPGETEADFQLLLDFLEEARLDRVGAFPYSEVEEADATHFEGRV
PEAVKEARLARFMEVAQRISAEKLQEKVGRTLEVIIDEYNDDEGDLSGTRLIGRTKGDAP
GIDGQVYLYAGELAGQVKIGDIVSARIEDADEYDLFGEVTALLPWQPNVPQLGALVKH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcttgtatgactgtcagtggcgagccccaagtgaacgcgaaaaaagtcggtttc
atcagcctgggctgccccaaggcgctggtggacagcgaacgcatcctgacgcagctgcgg
gccgagggctaccacatcgcgccgacctacgaggaggctgacactgtcatcgtcaacacg
tgcggcttcatcacgccggctgtcgaggaaagcctcagtgccatcggggaggcgcttgac
gcgaccgggcgtgtgatcgtcacagggtgtctgggagagcggcccgaaacgatccgcgag
cggcatcccaaggtggctgccatcacgggctcgcaggacgtcgaaggcgtcatgagcgcc
attcacgagttgcttccccccgaccagaatcccttcaccagcctgattccgggcatgtcg
ggcggcgaagtcaagctcacaccacgtcactacagttacctcaagatcgctgagggttgc
aaccacaagtgcgccttttgcatcattcccaagctgcgcggtctgcaggcttcgcgtgat
gcgggcgaagtgctctacgaagcttttcgcctgattgccagcggtacgcgcgaactgatg
gtgatttcgcaggacaccagcgcttacggcatcgacgtccgttaccgcgaaagcgaattc
cagggtaagcaggttcgtgcccacctgctcgacctggccgtcaagctgggcgagatgggc
gcctgggtgcgcatgcactacgtgtatccctacccgcacgtcgatgaaatcgtcaagctg
atggcgcagggcaagattctgccttacctggacgtgccgctgcagcacgccagcccggag
gtgctgcgacgtatgcgccgccccggcgcgggcaggcagcttgacaccatccggcgctgg
cgggaaatctgcccggacctgaccatccgctcgacttttatcgtcggttttcccggcgaa
accgaagcagacttccagctgctgctcgacttcctcgaagaagcccgcctggaccgggtg
ggcgcctttccctacagcgaagtcgaggaggccgacgcgacccacttcgagggccgggtg
cccgaagccgtcaaggaagcccgccttgcccgttttatggaagtcgcgcagcgcatcagc
gcggagaaactgcaggaaaaagttggtcggaccctcgaagtcatcatcgacgagtacaac
gacgacgaaggcgacctcagcggcacgcgcctgatcggccgcaccaaaggcgacgcccct
ggcatcgacgggcaggtctatctgtatgccggcgaactggccggtcaggtaaaaatcggc
gacattgtgtctgcccgcatcgaggatgccgacgagtacgatttgttcggcgaggtcacg
gcgctgttgccgtggcaacccaacgtgccgcagctgggcgccctcgtcaagcactga
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