Deinococcus peraridilitoris: Deipe_3148
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Entry
Deipe_3148 CDS
T02381
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
dpd
Deinococcus peraridilitoris
Pathway
dpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Deipe_3148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpd03400
]
Deipe_3148
DNA repair and recombination proteins [BR:
dpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Deipe_3148
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Deipe_3148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
ArfGap
Motif
Other DBs
NCBI-ProteinID:
AFZ68593
UniProt:
L0A3Y9
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All DBs
Position
complement(3147360..3148100)
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AA seq
246 aa
AA seq
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MSSRHANRSGIVLRRYVTPAGDVILTMLTPQGKLRAIARGGARGALRSKLNLFQHLTLQI
YTTPRNDLPTIQQIVLEGALPRLAGPQCYAYVHLLAELADALVQEGEHSEQAFELFSGAL
RGLSHHTDPEWVALVMSYKLLILAGFVPRAASCARCGAPNPRHPDPLSGHLVCAACAELP
ALPPEGVEFLRSLPRSTVRMLMVSPLAVEARASLWKALERFVTLHVGEVRSWRALPHESL
PMVQMQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttcccgccatgccaaccgcagcggaatcgtcctgaggcggtatgtcacgcctgcc
ggggacgtcattctgacgatgctcacgccgcaaggaaaactgcgcgccattgcccgtggc
ggcgcgcgaggcgcgctgcgcagcaagctcaacttgtttcagcacctgaccctgcagatt
tacaccaccccgagaaacgatctgccgaccattcagcagatcgtgctggaaggggccctg
ccgcgcctcgccggcccgcagtgttacgcctacgttcacctgctggccgagctggccgac
gcgctcgttcaggaaggtgagcacagcgagcaggcctttgagctgttttccggcgccctg
cgcggcctgagtcaccacaccgaccccgagtgggtcgcgctggtcatgagctacaaactg
ctgatcctggccggcttcgtaccgcgcgctgcctcttgcgcacgctgtggagcccccaac
ccccgccacccggaccccctcagcgggcacctggtgtgcgctgcctgtgccgagttgcct
gcactaccgccagaaggcgtggagtttctgcgcagcctaccccgctcgacagtgcgcatg
ctgatggtctctcccctggcagtggaggcacgcgccagtctctggaaagccctggaacgc
tttgtcacgctgcacgtgggtgaggtgcgttcctggagagccctgccacatgaatccctg
cccatggtgcagatgcagtga
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