Deinococcus peraridilitoris: Deipe_3162
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Entry
Deipe_3162 CDS
T02381
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dpd
Deinococcus peraridilitoris
Pathway
dpd03030
DNA replication
dpd03410
Base excision repair
dpd03420
Nucleotide excision repair
dpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Deipe_3162
03410 Base excision repair
Deipe_3162
03420 Nucleotide excision repair
Deipe_3162
03440 Homologous recombination
Deipe_3162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpd03032
]
Deipe_3162
03400 DNA repair and recombination proteins [BR:
dpd03400
]
Deipe_3162
Enzymes [BR:
dpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Deipe_3162
DNA replication proteins [BR:
dpd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Deipe_3162
DNA repair and recombination proteins [BR:
dpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Deipe_3162
NER (nucleotide excision repair)
GGR (global genome repair) factors
Deipe_3162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
Taq-exonuc
5_3_exonuc_N
5_3_exonuc
TraI_hel_assoc_N
HHH_5
HHH_2
DUF4055
Imm50
Motif
Other DBs
NCBI-ProteinID:
AFZ68607
UniProt:
L0A636
LinkDB
All DBs
Position
complement(3160493..3163027)
Genome browser
AA seq
844 aa
AA seq
DB search
MSAPVSQNPGTVVLVDGHALAYRSYFAISSLTTSKGESVQAIFGFLRQLLRLLRNDAQQV
IVVFDAPAKTFRHEQFEGYKAGRAKTPEDLPGQINRIRKLVDLLGLQRFEMPGYEADDII
GTITRRAEAQGYQVRILTSDRDAYQLLDDQVRVINSAGELLGPAEIHEKYGVTVRQWVDF
RALTGDASDNIPGAKGIGPKTAAKLLQDYGSLDAVLQEAQNGTLKPKGAQEKIAASIEDV
KFSRELSCMVTDLDVDVQIGEKRGKIDLEPLLAELRDLEFNSLVRDVMGLLGDGDAPQAT
PEPEAPTLAPWQTPTEGVIWGYRLTREDDLQAELAEVATWDGEAARVLEQVELAEFVGQR
SVNAINAKALATHLMVRGVNVLPGEDPMLMAYLIDSAVTTPQLACEKHLGHAWPDQAAGR
AVAGGRLLDALQDKLDERRRILYDQVEKPLSSVLAKMEVHGIRIDSDYFRALSLSMGARI
GNLESDIYGHAGREFPIGSRDQLEKVLYDELGLASSKKTKLTGKRSTAVGALEPLRDEHP
IIPALLEYRELTKLKSTYLDAMTQLVNPHTGRLHTTFSQTSVATGRLSSLNPNLQNIPIR
TETGREIRKGFVADSGYCLISADYSQLELRLLSHIADDPKMQQAFIDGADIHRRTASQVL
GVSEELVQPQQRRAAKTVNFGVLYGMSAHRLSNDLKIPYAEAAGFIERYFATYPGIREYI
DRTLAFCREHLYVETLMGRRRYVPEINASNKNVREAAERIAYNMPIQGTAADIMKLAMVR
LEGQLAALGARLLVQVHDEILVEVPEGVAQDVEQLIRREMLEVYDLKVPLGVEVGVGPNW
YDTK
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcccgtgtcccaaaatcccggaacggtcgtgctggtcgacgggcacgccctg
gcataccgctcgtactttgccatttccagtttgaccaccagcaagggcgagagcgtgcag
gcgattttcggctttctgcgccaacttcttcggctgctgcgcaatgacgctcagcaggta
atcgtggtgttcgacgctccggccaagacctttcgccacgaacagttcgaaggctacaag
gccggacgcgccaagacccccgaagatctgcccggacagatcaaccgcatccgcaagctg
gtcgacctgctgggtttgcaacgcttcgagatgcccggctacgaggcagacgacatcatc
ggcaccatcacccgccgcgccgaggcgcagggttaccaggtgcgcattctgacttcggac
cgtgacgcctaccagttgctcgacgatcaggtgcgcgtgatcaattctgccggagaattg
ctcggcccagcggaaattcacgagaagtacggcgtgaccgtgcggcaatgggtggatttc
cgtgcgctgaccggagacgccagcgacaacattcccggcgcgaaaggcatcggacccaag
acggcggccaagctgctgcaggactacggctcgttggacgccgttctgcaggaagcacag
aacggcaccctcaaacccaagggcgcgcaggagaaaattgccgccagcatcgaggacgtc
aagttcagccgcgaattgagctgcatggtcaccgatctcgacgtagacgtacagatcggc
gaaaagcgcggaaaaatcgatctggaacccttgctcgccgaactgcgcgatttggagttc
aactcgctcgtgcgtgacgtgatgggtctgctgggcgacggcgacgcgccccaggcgacg
cccgagccagaggcgcccacgctggcgccctggcagacccccaccgaaggggtcatctgg
ggctaccgactgacccgtgaagacgacctgcaagccgagctggccgaggtggccacctgg
gacggcgaggccgcccgggtgctcgagcaggtggaactggccgagttcgtcggacagcgc
agcgtgaacgccatcaacgccaaagcgctggcgacccatctgatggttcgtggcgtgaat
gtgctgcccggtgaggaccccatgctgatggcttacctgatcgacagtgccgtcaccacc
cctcagctggcctgcgagaagcacctcgggcacgcctggcctgaccaggcagcagggcgc
gcggtggccggtgggcgcctgctcgacgcgctgcaagacaagctcgacgaacggcgccgc
attttgtacgaccaggtagaaaaaccgctcagcagtgtgctggccaagatggaagtgcac
ggtattcgtatcgacagcgactacttccgcgcgctgagcctgtcgatgggtgcgcgcatc
ggcaacctggaaagcgacatctatggtcacgcgggccgcgaatttcccatcggcagccgc
gaccaactggaaaaagtactttacgacgagctggggctggccagcagcaagaagaccaag
ctgaccggcaagcgctccacggccgtcggtgccctcgaaccgctgcgcgacgagcacccg
atcataccggcactcctggagtaccgcgaactgaccaaactgaaaagtacctacctggac
gccatgacccagctggtcaatccgcacaccgggcgtctgcacaccactttctcgcagacc
tcggtggcgacgggtcgcctgtcgagcctcaatcccaatttgcagaacattcccattcgc
acggaaaccgggcgtgagattcgcaaggggtttgtcgccgattcgggctactgcctgatc
agcgccgactacagccagctggaattgcgcctgctgtcgcacatcgccgacgatcccaaa
atgcagcaggcctttatcgacggcgccgatattcaccgccggaccgcctcacaggtgctg
ggcgtttccgaggagctggtacagccgcaacagcggcgcgccgccaaaaccgtcaacttc
ggtgtgctctacggcatgagcgcgcaccgcctgtcaaacgacctcaaaattccttacgcg
gaagccgccggctttatcgagcgctattttgccacctacccgggcatccgcgaatacatc
gaccggacgctggccttctgccgggagcacctgtacgtcgagaccttgatgggacgcagg
cgctacgtacccgaaatcaacgccagcaacaagaatgtgcgcgaggctgccgagcgcatc
gcctacaacatgcccattcagggcacggcagctgacatcatgaagctcgccatggtccgg
ctggaaggacagctggctgcgctgggcgcacggctgctggttcaggtgcacgatgaaatt
ctggtcgaggtgccggaaggtgtcgcgcaggacgtcgaacagctgatccggcgcgaaatg
ctggaagtctacgacctgaaagtgccgctgggcgtcgaggtcggcgtcggcccgaactgg
tacgacaccaaataa
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