Deinococcus peraridilitoris: Deipe_3282
Help
Entry
Deipe_3282 CDS
T02381
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dpd
Deinococcus peraridilitoris
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpd03032
]
Deipe_3282
03400 DNA repair and recombination proteins [BR:
dpd03400
]
Deipe_3282
Enzymes [BR:
dpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Deipe_3282
DNA replication proteins [BR:
dpd03032
]
Prokaryotic type
DNA Topoisomerases
Deipe_3282
DNA repair and recombination proteins [BR:
dpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Deipe_3282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AFZ68723
UniProt:
L0A4B2
LinkDB
All DBs
Position
3297533..3300445
Genome browser
AA seq
970 aa
AA seq
DB search
MPKTLVIVESPAKAKTIGKYLGKGYVVESSIGHIRDLPRSASEIPERYKGEAWARLGINV
EEDFRPLYIVAPEKRSQVAKLKSLVKDADLVVLATDDDREGESIAWHLLQELKPKVPVKR
MVFHEITKEAIASAIQHPRNIDENLVEAQEARRALDRLYGYEVSPVLWKKVAPKLSAGRV
QSVATRMLVERERERMRFVSGSWWDIEGRFQVAEGEGFPATLIELDGKKLAQGKDFDPAS
GQLKKSADVWQLSEQQARELAESLAGQPFRVLSAEEKPFTQRPYAPFITSTLQQEGGRKL
GMNASRTMRAAQKLYEGGYITYMRTDSTTLSKEAMDAARSQVRAMYGEQYLHPTPRTYEK
KSKNAQEAHEAIRPAGSSFRTPESLRGEISGDEWRVYDLIWKRTVASQMADARGRRLQVR
LGGRAQDGRDTVFAASGKAIDFPGFLRAYVEGSDDPEAALEDREVLLPALKSGDGVTARD
LKPLGHATQPPARFTEASLVQALEGAGIGRPSTYASILGTIQDRGYAVKRGQALVPTWTA
FATSALLEHHFGRLVDYDFTARMEEDLDDIAGGRQKRAPYLRGFYLGEQEGLGLKNLVET
RLEAIDPREIATIEVPKLAGSGIEVRVGRYGPYLTRGEARANLPEELTPDELTAEKAEEL
LGRPSGERPLGNDPETGLPVIARAGRFGPYVQLGEGNTPVKTSSLLPGDDLNTLSLERAL
ELLTLPRFVGTLEGEEVWAHNGRYGPYLKRGSDSRSLNNHEELFSVTHEQAEQLFAQPRV
FGRRGAASGPLKRFEFSDRTTIDLKSGRFGPYLTDGTVNATLRKDEGGENLTPDEARSIL
EERGKEPKSKAGKTARGGKASAAKGGKAAKTTTKKTGTAETAKPARKPAAGAAKIKKGKK
APAKVTPSWDALRRHVGVLSETERRLVIAVRDEGHKVDEIAPVLGLEVNKAKGMLLQIGR
KLNQAARAGA
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagaccctcgtcatcgtcgaatcgcccgcgaaagccaaaaccatcgggaaatac
cttggtaaaggctatgtcgtggagtcttccattgggcacatccgcgatctgccgcgcagc
gcctccgaaattcccgagcgctacaaaggcgaagcctgggcccggcttggtatcaacgtc
gaggaggacttccggccgctgtatatcgtggctcccgagaaacgcagccaggtggccaag
ctcaagtcgctggtcaaggacgccgacctggtggtcctggcgaccgacgacgaccgcgag
ggtgaaagcatcgcctggcacctgctgcaggaactcaagcccaaggtgccggtcaagcgc
atggtgtttcacgagatcaccaaggaagccattgccagcgccattcagcatccgcgcaac
atcgacgagaacctcgtggaggctcaggaagcgcgccgggcgctcgaccgcctgtacggt
tacgaggtcagcccggtgctgtggaagaaggtcgcacccaagctcagcgcgggtcgggtg
cagagcgtggcgacccgcatgctggtcgagcgtgagcgcgagcgcatgcgctttgtcagt
ggctcgtggtgggacatcgagggccgctttcaggttgccgaaggagaaggctttcccgca
accctgatcgagctcgacggcaagaagctcgcgcagggcaaggacttcgacccggccagc
gggcagctcaaaaagagtgccgacgtgtggcagctgagcgaacaacaggcccgtgaactg
gccgaatcgctcgccggtcagcctttccgggtgctgtccgccgaggagaagcccttcacg
cagcgtccctacgcgcccttcatcacctcgacgctgcagcaggagggggggcgcaagctg
ggcatgaatgccagccgcaccatgcgtgccgcgcagaagctgtacgaaggcggctacatt
acctatatgcgcaccgacagcaccacgctgtcgaaagaagccatggacgccgcgcgcagt
caggtgcgcgccatgtatggggagcagtacctgcaccccacgccgcgcacctacgagaaa
aagagcaagaacgcccaggaagcccacgaagccattcgcccggcggggtcgagcttccgc
acgcccgaaagtctgcgcggcgaaatcagcggggacgagtggcgcgtgtacgacctgatc
tggaagcgcaccgtcgcttctcagatggccgacgcgcgtgggcggcgactgcaggtgcgc
ctgggtggtcgcgctcaggacggacgcgacacggtcttcgctgcgtcgggcaaggccatc
gactttcccggcttcctgcgcgcctacgtcgagggcagtgacgaccccgaggctgccctg
gaagaccgcgaagtgctgttgcccgccctgaagagcggagacggcgtcacggcgcgtgac
ctgaaaccactggggcacgccacgcagccacccgcgcgcttcaccgaagcctcgctcgtg
caggcgctggaaggcgcgggaatcgggcggcccagcacctacgccagcattctggggacc
atccaggaccgggggtacgccgtgaagcgcggacaggcactggtgccgacctggactgcc
tttgcgacctcggcgctgctggagcaccacttcggtcgcctggtggactacgacttcacc
gcccgcatggaagaagacctcgacgacatcgccggaggccgccagaagcgcgcgccgtac
ctgcgtggcttctacctgggagagcaggagggcctgggcctcaagaacctggtggaaacc
cgcctggaggccatcgatccccgcgaaatcgccaccatcgaggtgcccaagctggcgggc
agtggcatcgaggtgcgggtcgggcgttacggtccctacctgacgcgaggcgaggcgcgc
gccaacctgcccgaggagctcacccccgacgaactcaccgccgagaaagccgaggagctg
ctcggtcggcccagcggcgagcgtccgctgggcaacgaccccgagaccggcctgccggtg
attgcgcgcgccgggcgttttggtccctacgtgcagttgggcgagggcaacacgccggtc
aagacctcgtcactgctgccgggagacgacctgaacaccctgtcactggagcgcgcgctg
gagctgctgaccttgccgcgctttgtgggcaccctggagggtgaggaggtctgggcgcac
aacggccgctacggcccgtatctgaagcgtggcagcgacagccgcagcctgaacaaccat
gaggaactgttcagcgtcacgcacgagcaggccgagcagctcttcgcgcagccacgcgtg
ttcggacggcgtggcgcggcaagcgggccgctgaaacgcttcgaattttccgaccgcacg
accattgatctcaaaagcggccgtttcggcccttacctgaccgacgggaccgtaaacgcc
acgctgcgcaaggacgagggcggcgagaacctcacgcccgatgaagcgcgcagcatcctc
gaagagcgcggcaaggaaccgaaatcgaaggcaggcaagacggcccggggcggcaaggcc
agtgcggccaagggcggcaaggcggccaagaccaccacgaaaaagaccggtaccgccgag
acggccaagcctgcacgcaaacctgctgctggggcggccaaaattaagaagggcaagaag
gctcctgccaaagtcacgccttcctgggacgccctcagacggcacgtcggagtgctgagc
gaaaccgagcggcgcctggtgattgccgtgcgcgacgagggccacaaggtggacgagatc
gcgccggtgctgggcctggaagtcaacaaggccaagggcatgttgctgcagatcgggcgc
aagctcaatcaggccgcccgcgccggagcgtag
DBGET
integrated database retrieval system
