Deinococcus peraridilitoris: Deipe_3487
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Entry
Deipe_3487 CDS
T02381
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
dpd
Deinococcus peraridilitoris
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpd03400
]
Deipe_3487
DNA repair and recombination proteins [BR:
dpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Deipe_3487
Archaeal homologous recombinant proteins
Deipe_3487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
AFZ68920
UniProt:
L0A786
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All DBs
Position
3507252..3508454
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AA seq
400 aa
AA seq
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MRLLHTADFHAGRTLRGFDRTPEIRAALTEVADLAKSERADAVLVAGDLFDSVNPSAEAE
SAIYDFFLRLRELEIPSVAIAGNHDSANRLAGLSGLLGWVGVHLVAQMPASPQAAVRTIT
AKNGTDLVVAAFPFLSERRLVKYADVLGGDVGAWRQKYREGMGFFMGQFERSFRANAVNT
LMLHATVEGSAPSGSERTFLFDLTNAYTVSPQQFPTSAQYVALGHVHKPQQPSEAPPAYY
PGSLIQLDFGEAGERKGVNLVEVEPGRPAKVHFLPLSAGKPLKVVKSDLDDLDRKLAAVA
DFPGLLKVVVQVPGGATMPGLKDRVLRLLPQTLAIETEAVGEAAPASVERRDGLTPLQLF
ERYYRERRGVETLPSNLKAAFEEADRLAREEEVPGAGVNA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttactgcacaccgccgacttccacgccggacgcaccctgcgcggctttgaccgg
acccctgaaattcgggccgccctcaccgaagtggccgatctcgcgaagagtgagcgggca
gatgccgttctggtggccggcgacctctttgattcggtcaaccccagtgccgaagccgag
tcggccatctatgatttctttttgcgtctgcgcgaactggagattcccagcgtcgcgatt
gccggcaaccacgacagcgccaaccgacttgctggcctttcgggtctgctgggctgggtc
ggggtgcacctcgtcgcgcagatgcccgcgagtccgcaggcggcggtgcgcaccatcacc
gccaagaacggcacggacctggtggtggcggcctttccgtttctcagcgagcgtcgcctg
gtgaagtacgccgacgtgctcggcggggacgtcggggcctggcggcagaagtaccgcgaa
ggcatgggttttttcatggggcagttcgagcgttccttccgggcgaacgctgtcaacacc
ctcatgctgcacgcgaccgtcgaaggcagtgccccgtcgggctccgagcggaccttcctg
ttcgacctgaccaacgcctacaccgtgtcgccccagcaattcccgaccagcgcccagtac
gttgcgctgggtcacgttcacaagccgcagcagccctccgaggcgccgcccgcgtattac
ccgggcagcctgattcagctggacttcggggaggccggcgagcgcaagggagtcaacctg
gtggaggtcgagccgggccgaccggccaaagtgcattttttgccgctctcggctggaaaa
cccttgaaggtggtcaagtcggaccttgacgatctggaccgcaagctggccgccgtggcg
gactttcccggcttgctgaaggtggtggtgcaggtgccgggcggagcgacgatgcccgga
ctcaaggaccgggtgctgcggctgttgccacaaacgctcgccatcgaaaccgaagcggtg
ggcgaggcagcgccggccagcgtggagcgccgcgacggcctgaccccgctgcagctgttc
gagcggtactatcgggagcggcgtggcgtcgagaccctgccgtcgaacctgaaagccgcc
ttcgaggaagccgaccgactggcccgcgaagaagaagtgccgggtgccggggtgaacgca
tga
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