Deinococcus peraridilitoris: Deipe_3488
Help
Entry
Deipe_3488 CDS
T02381
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dpd
Deinococcus peraridilitoris
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpd03400
]
Deipe_3488
DNA repair and recombination proteins [BR:
dpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Deipe_3488
Archaeal homologous recombinant proteins
Deipe_3488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
ABC_tran
Med9
DUF7310
AAA_15
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AFZ68921
UniProt:
L0A4Y3
LinkDB
All DBs
Position
3508451..3511180
Genome browser
AA seq
909 aa
AA seq
DB search
MKPLKLAVQGFTCFRQHVEIDFEHLELYAIQGPTGSGKSSLLDAVMYALYGQTPRLGKIG
HDALISQGERGLSISLEFESAGARYRVARARGRRQADNEVRFETWNGERFVTLTETKKAE
TQLAIEKVVGLNFDSFTRAVVLPQGQFDRFLRGTGKERQELLGALLDLDHYRRMAEVAGE
RKAALSADLRAQQTLLDGEYASLTPEVLDGWRTEVRLAEEAAEQGQSVREQLSARVAELA
QIGALHAQLRAARASLSELEERRAATNEALERARRARRVAGVLPRIEARDRAQSRAERAM
AEVSAARQTRDERVVGVRAALQQSQEAQSALQECPALQRRADGLHEAERKLAVLRRHGGS
LGLTDPSPRAWDEDAFVQARERVNFQQQLSVEAKAIEHEAREIAALRLRVASDDENLAAW
RLQQEDVTEKGRQIRSEHDVAAAELRSVREREGALALRHQLHVGQPCPLCEQTVHALPAP
PAVDMATLEQRTLTLEEALLALRDRLSELRANIRALEGTVTRDRSDLYRREEALNSRREA
LRRLQEQLSGDAAAEARSLLAGLAAELRASGDDPAGQRRALLSEIAMRVSRTEEIRRRAA
TLEVSLAAAEAALSSAERGMAERQSEFDSAEQVLSTSLAELRLTEAQASSAALPEHEILG
LEERYRLWSTVLEKCQGEVADLESTLGGRTFDERELLEARAQCERAEQYVTASRRRAAEL
AAQLRAGEEKLARKLELEAALARTSRDLDTWSALAQSLRANEFQQFLLAEVESSLLDRAG
ELLFEISDGRYRLLLESGEYSVQDLWNAGETRGVKTLSGGETFLASLALAIALSDYLAGN
HILGALFLDEGFGTLDPQALEAVAGALEKVRTQGRTVGVITHVESLSERLPSRILVSKSV
AGSRALRME
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgctcaagctggccgtgcagggcttcacctgctttcgacagcacgtcgaaatc
gacttcgagcacctggaactctacgccattcagggcccgacgggcagcgggaagtcgagt
ctgctcgacgcggtgatgtacgcgctgtacggccagacgccgcgcctaggcaagatcggg
cacgacgcgctgatttcgcagggtgagcggggtctctcgatcagtctggaattcgagtcg
gccggtgcgcgctaccgagtcgcgcgcgcgcgtgggcgacggcaggccgacaacgaggtg
cgtttcgagacctggaacggtgaacgtttcgtgacgctcaccgaaaccaagaaagccgag
acacaactggcgatcgagaaggtggtcggactcaacttcgattcgtttacccgcgccgtg
gtcctgccgcaaggacaattcgaccgttttctgcgaggcaccggcaaggagcgtcaggaa
ctgctgggcgcgctgctggacctcgaccactacagacgcatggccgaggtggcgggtgaa
cgcaaggcggccctgagcgccgatctgcgcgcccaacagaccctgctcgacggcgagtac
gccagcctgacgccagaggtactggacggctggcgaactgaagtgcggctggccgaggag
gccgccgagcagggtcagtcggtgcgtgagcagctgagcgctcgggtcgccgagctggcc
cagatcggggcgctgcacgctcagctgagagcggcacgcgcttcactgagcgagctcgag
gagcgccgtgcggcgaccaacgaagccctggagcgcgcccgccgtgcccgccgggtcgcg
ggcgttctgccgcgcatcgaggcgcgtgaccgcgcgcagtcacgcgctgagcgggcgatg
gcggaggtcagcgcagcccggcagacacgtgatgagcgcgtcgtcggggtgcgcgcggcg
ctgcagcagtcccaggaggcgcagagcgctctgcaggaatgccctgccttgcagcgccgc
gcggacggcctgcacgaggccgaacgtaaactggcagtgttgcggcgtcacggcggttcg
ctcgggctgaccgacccatcgccgcgcgcctgggacgaagacgcttttgtgcaggcacgt
gagcgcgtgaatttccagcagcagctttcggtcgaggcgaaagccatcgaacacgaagcg
cgtgaaattgccgccctgcggctgcgggtggcgagcgacgacgaaaatctggccgcctgg
cgccttcagcaagaagacgtgacggaaaagggccggcagattcgcagtgagcacgacgtg
gcggcagctgaattgcgttccgtgcgcgaacgtgagggtgcactggccttgcgtcaccag
ttgcacgtcggtcagccctgcccactgtgcgagcagacggtgcacgcgctgcccgcgcct
cccgccgtcgatatggctaccctggaacagcgcaccttaacgctcgaggaagccctgctg
gcgctgcgagaccggctcagcgagctgcgtgccaacatccgtgcgctggagggcaccgtg
acccgggaccgctctgatctctatcgccgtgaagaggcgctcaactcccgccgtgaggcc
ctgaggcgcctgcaggagcagctctcaggcgacgctgccgccgaggcgcgttcgctgttg
gccggtctggccgctgaattgcgtgccagcggtgacgacccggccgggcaacggcgcgcg
ctgctgagcgaaattgcaatgcgggtctcccgtaccgaggaaatccgtcgccgcgccgcg
accctcgaggtgtcgctggccgccgccgaagcggccctaagctccgccgaacgcggtatg
gccgaacgccagagcgaattcgacagcgcggagcaggtcctgagtaccagcctcgccgag
ctgcggctgaccgaagcgcaggccagttcggcagcgctgcccgagcacgagatcctcggg
ctcgaagagcgctaccggctgtggagcacggtcctggagaaatgccagggcgaggtggcc
gatctggagagcactttgggtggccgcacgttcgacgagcgggagttgcttgaagcgcga
gcgcagtgtgagcgtgccgagcagtacgtcacggcctcacggcgccgcgccgcggaactg
gcggcgcagctgcgcgccggagaggagaaactcgcgcggaaactcgaacttgaagcggcc
ctggcccgcacctcgcgcgatctggacacctggtcggccctggcgcagtcccttcgggcc
aacgagttccagcagtttctgctggctgaagtcgaatcgagcctgctggaccgggcgggc
gagctgctgttcgagatcagcgacggacgctaccgcctgctgctggaaagcggtgagtac
agcgtgcaggatctatggaatgccggcgagacccgcggtgtcaagaccctttcgggaggc
gagacttttctggccagcctggccctggcgattgccctgagtgattaccttgccgggaat
catattctcggggcactttttctggacgagggatttggcaccctcgatccgcaggccctg
gaagcggtggcgggcgccctcgaaaaggtccgtactcagggccgtacggtgggggtcatt
actcacgtcgagagtctctcggagcgcctgccgtcacgcattctggtgagcaagagcgtg
gctggcagccgcgccctccgcatggaataa
DBGET
integrated database retrieval system
