Deinococcus peraridilitoris: Deipe_3622
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Entry
Deipe_3622 CDS
T02381
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dpd
Deinococcus peraridilitoris
Pathway
dpd03420
Nucleotide excision repair
dpd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Deipe_3622
03430 Mismatch repair
Deipe_3622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpd03400
]
Deipe_3622
Enzymes [BR:
dpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Deipe_3622
DNA repair and recombination proteins [BR:
dpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Deipe_3622
MMR (mismatch excision repair)
Other MMR factors
Deipe_3622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
Acetyltransf_1
ResIII
DAHP_synth_2
Motif
Other DBs
NCBI-ProteinID:
AFZ69050
UniProt:
L0A7L7
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All DBs
Position
3648962..3651190
Genome browser
AA seq
742 aa
AA seq
DB search
MKTAQDLLSQLNPAQAEAAAHFTGPALVVAGAGSGKTRTLIYRIAHLIQEHGVEPEEILA
VTFTNKAAAEMRERAGHLIEGAGELWMSTFHSAGVRILRAYGEYIGLKRGFVIYDDDDQL
DLLKEIMGNLPGVGPDANPRQLRAVIDRAKSNLWTPDDLARSGEDFIAGLPRATAVEGYR
RYQGRMKGVGAIDFNDLIVLTVHLFQEVPAVLNKIQDRARFIHIDEYQDTNRAQYELTRL
LASRDRNLLVVGDPDQSIYKFRGADIQNILDFQKDYRDARIYRLEDNYRSSASVLALANK
LIENNTERLEKTLRPVKQSGEAVRFHRAIDHRSEADFVADRITRLHAEGLNLGQIAILYR
TNAQSRVLEESLRRLNIPAKIVGGVGFYDRREIKDILAYARLAINPGDDVALRRIVGRPR
RGIGDQALAKLAEWAAARSVSILEACAQAEEVLERGANKAVEFAALMTSFSEGVEAYPPQ
GFLRLLIEGSGYVEMLRAEGTEGQVRLENLEELVVAAEEWSREQEAHGSGGTIADFLDDA
ALLASVDDAKTRRENNGVPEDAVTLMTMHNAKGLEFPAVFIVGAEEGLLPSKNSLVEAGG
IEEERRLFYVGITRAMDRLYLTAAQNRMMYGKTATTEDSRFLEELEGGFVPVDQFGQEVD
YKKSSWRQYRPTVPVAPPARKDTSSMTAGMAYKGGERVKHPKFGEGRVLAVSGFGDKQEV
TVSFNSAGMKKLLVRFANLQSV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
gtgaagacggctcaagacctgttgtcgcaactcaatcctgcgcaggccgaagcggcggcg
cactttacgggtcctgccctcgtcgtcgcgggcgccggcagcggcaagacgcgcaccctg
atctaccgcatcgctcacctgatccaggagcacggcgtggagccagaggagattctcgcg
gtaacctttaccaacaaggccgccgccgagatgcgcgagcgggccgggcacctcatcgaa
ggagccggcgaactctggatgagtaccttccactcggcgggagtgcgcattctgcgcgct
tacggggaatacatcggcctcaagcgtggcttcgtgatctacgacgacgatgatcagctc
gatctgctcaaggaaatcatgggcaatctgccgggcgtcggtccggacgccaacccccgg
cagctgcgcgcggtgatcgatcgggccaagagtaacctctggactcccgacgacctggcg
cgcagcggggaggacttcatcgcaggtctgccgcgcgcgactgccgtcgaaggctaccgc
cgatatcaggggcgtatgaaaggcgtcggcgccatcgatttcaacgacctgatcgtgctc
accgtgcacctgttccaggaagtgccggcggtgctgaacaaaatacaggaccgggcgcgc
ttcattcacatcgacgagtatcaggacaccaaccgcgcgcagtacgagctcaccaggctg
cttgccagccgggaccgcaacctgctggtggttggagacccggatcagagcatctacaag
tttcgcggtgccgacattcagaacattctcgatttccagaaggactaccgtgacgcacga
atttaccgtctggaggacaattaccgctccagcgcgagcgtcctggcgctcgccaacaag
ctgatcgaaaacaacaccgagcgtctcgagaagacgctgcggccggtcaagcaatccggc
gaggcggtgcggtttcaccgggcgatcgaccaccgcagcgaagccgactttgtggccgat
cgcatcacccgcctgcacgccgagggactgaacctcggtcagatcgcgattttgtaccgc
accaacgcgcagtcgcgggtgctcgaggaaagcctgcggcggctgaacattcccgcgaaa
atcgtgggcggtgttgggttttatgaccgacgcgagatcaaggacatcctggcttacgcg
aggctcgccatcaatcccggggacgacgtggcgctgcggcgtattgtcggacggccccgg
cgtggcatcggcgatcaggcgctcgccaagctggccgagtgggcggccgcacggagcgtg
agcattctggaggcgtgcgcgcaggccgaggaagtgctggaacgcggcgccaacaaggcc
gtcgagttcgctgcgctgatgacgtcgttctcggaaggcgtagaagcctatccgccccag
ggatttttgcgtctgctgatcgaggggtcgggatacgtcgagatgcttcgcgctgagggt
accgaaggacaggtccggttggaaaacctcgaggaactggtggttgccgccgaggaatgg
tcgcgcgaacaggaagcccacggctcaggaggcaccatcgcggactttctggacgacgcg
gccctgctcgccagcgttgacgacgccaagacccgccgggaaaacaacggtgttcccgag
gacgccgtcaccctgatgaccatgcacaatgccaagggcctggagttcccggcggtgttc
atcgtcggtgccgaagaaggcctgctgcccagcaagaacagcctggtcgaggcaggcggc
atcgaggaggaacggcggctgttctacgtcggcatcacgcgagccatggaccgcttgtac
ctgacggcagcgcagaaccgcatgatgtacggcaagaccgccaccaccgaagactcgcgc
tttctggaggaactggaaggtggatttgtgccggtcgaccagttcgggcaggaagtcgat
tacaagaagtccagctggcgtcagtaccgcccgaccgtacccgttgctccgcccgcccgc
aaggacaccagcagcatgactgccgggatggcctacaagggcggtgaacgggtcaagcac
cccaaattcggcgagggtcgggtgctggccgtttccggtttcggtgacaagcaggaagtg
acggtgagtttcaactcggccggaatgaaaaagctgctcgtgaggttcgccaacttgcag
tcggtttga
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integrated database retrieval system
