Drosophila persimilis: 113564958
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Entry
113564958 CDS
T01063
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
dpe
Drosophila persimilis
Pathway
dpe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113564958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpe03019
]
113564958
Enzymes [BR:
dpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
113564958
Messenger RNA biogenesis [BR:
dpe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113564958
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113564958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
113564958
NCBI-ProteinID:
XP_026840524
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MKGNHYKMSRNKDKYDSANRRQQIFLSQEDIAAGKKTNWSGLEITGCVRNISPSLWEFEH
LTALYLNDNQLLRLPADVGMLTSLRTLDLSSNKLRSLPAELGELIQLRELLLNNNFLRVL
PYEIGKLFHLVILGLMGNPLQKEFMNIYNEPNGTSKLLTYMLDNLSFTVNPPPQRPWLPL
AKPNKTRPACIFTVMCYNVLCDKYATRQMYGYCPSWALCWDYRKKSIIDEIRHYSADIIS
LQEIETEQFYHFFLPELKNDGYEGIFSPKSRAKTMSEVERKYVDGCAIFFRASKFTLIKE
HLIEFNQLAMANAEGSDNMLNRVMPKDNIGLAALLKVKENAWEPMSEVTQISQPLLVCTA
HIHWDPEFCDVKLIQTMMLSNELKTIIDEASHSFRPGHKNDSNSVQLLLCGDFNSLPDSG
VVEYLGKGRVSMDHLDFKDMGYKSCLQRLLSNDTNEFTHSFKLASAYSEDIMPHTNYTFD
FKGIIDYIFYTKTGMVPLGLLGPVSNDWLRENKVVGCPHPHIPSDHFPLLVELELMHTAS
QAPPNGLINRR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaaccattataagatgtctcgtaacaaagacaaatacgacagcgctaatcga
aggcagcagatctttctttcccaagaggatattgccgctggcaaaaagacaaactggagc
ggcctcgaaataactggctgcgtgcggaacatcagcccctcgctgtgggagttcgagcat
ttgaccgccctctacctgaacgacaatcagctgctgcgtctccccgccgacgtgggcatg
ctgaccagtctccgcacactggatctctccagcaataagctgcgaagtctccccgccgag
cttggagagttaatacagctgagggaactgctgctgaacaacaactttctgcgcgtgctg
ccgtacgagattggcaagctcttccatctggtcatactcggcctgatgggcaatccgctg
caaaaggagtttatgaacatctacaacgagccgaatggcacgtccaaactgctcacctac
atgctggacaacttgtcatttaccgtgaatccaccaccccagaggccgtggctgcccctg
gccaagccgaacaaaacgcgtccagcctgcattttcacggttatgtgctacaatgtgctc
tgcgataaatatgcgacacggcaaatgtacggctactgtccatcgtgggccctgtgctgg
gattatcgaaaaaagtcaatcatcgacgagatccgtcactattcggcggatattataagc
ctgcaggagatagaaacggagcagttctatcacttctttttgccagagctcaagaacgat
ggctacgagggcatattctcgcccaagtcgcgtgccaagacaatgtccgaggtggagcgg
aagtatgtcgatgggtgtgcaatcttcttcagggcctcaaaattcaccttgatcaaggag
cacttgatcgaatttaaccagctggcgatggccaatgcagagggatcggataacatgctg
aaccgtgtgatgcccaaggacaacattggtctggccgctctgctcaaggtgaaggagaat
gcctgggagccgatgtccgaggtgacacagatctcacagccgctgctcgtctgcacggcg
cacatccactgggatccggaattttgtgatgtcaagctcatccagacgatgatgctcagc
aatgagctcaagacgataattgacgaggcctcgcacagcttcagaccgggacacaagaac
gactcgaacagtgttcagctactgctctgcggcgacttcaattcgctacccgactccggg
gtggttgagtatctgggcaagggacgggtctccatggaccatctggactttaaggacatg
ggctacaagtcgtgcctgcagcgcctgctttcgaacgacaccaacgagttcacgcattcc
ttcaaactggcctccgcgtacagcgaagatatcatgccgcacactaactacacgttcgat
ttcaaaggcatcatcgactacatattctatacgaagacgggaatggtgcctctgggtctg
cttgggcccgtctcaaatgattggctgcgcgagaacaaggtggtgggatgtccccatccg
cacataccctccgatcattttccgctgctcgttgaactggagttgatgcacacggccagc
caggcgcctcccaacgggctgatcaacagacggtag
DBGET
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