Drosophila persimilis: 113565964
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Entry
113565964 CDS
T01063
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
dpe
Drosophila persimilis
Pathway
dpe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113565964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpe03041
]
113565964
Enzymes [BR:
dpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113565964
Spliceosome [BR:
dpe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
113565964
Complex C
U5 SnRNP specific factors
113565964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
113565964
NCBI-ProteinID:
XP_026845218
LinkDB
All DBs
Position
Unknown
AA seq
2142 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERPRRDEATGEVCSLVGKLDGTRMGDRYQRTK
PEKTEERKVKRQKRDEAQYDFERMKGATLLSEGIDEMVGIVYRPKTQETRQTYEVLLSFI
QEALGDQPRDILCGAADEILAVLKNDRLKDRERKRETDSLLGAVTDERFALLVNLGKKIT
DFGSDAVNALTATTNTEEQIDEQYGINVQFEESEEESDNDMYGEIRDDDVPDEGEEARID
HTLHAENLANEEAASNVKKDRILHPLDIDAYWLQRCLSKFYKDAMVSQSKSADVLKILKD
AADERDCENQLVLLLGYDCFDFIKQLKLNRQMILYCTMLASAQTDSERQRIREKMRGNTS
LAKILRQLDTGKSEEQEESETRGNKRGKGDAEDGGAAAAGQVAGVRQLLELDELAFTHGS
HFMANKRCQLPDGSYRKQRKGYEEVHVPALKAVPFDDNEELQPIDKLPKYCQPVFEGFKT
LNRIQSRLYKAALDSDENMLLCAPTGAGKTNVALLTMMREIGKHINEDGTINTQDFKIIY
VAPMKSLVQEMVGNFGRRLACYNLVVSELTGDHQLTREQIAATQVIVCTPEKWDIITRKG
GERTFVSLVRLVIIDEIHLLHDERGPVLEALVARTIRNIETTQEDVRLVGLSATLPNYQD
VATFLRVKPDKGLFYFDNSYRPVSLEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRNQ
VLVFVHSRKETGKTARAVRDMCLEQDTLGSFLREGSASMEVLRTEAEQVKNSELKELLPY
GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR
WVELSALDVLQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQLPIESQFISKLPDM
LNAEIVLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTA
ACCLERSGLVKYERKTGHFQVTDLGRIASHYYLTHETMLTYNQLLKQTLSEIELFRVFSL
SSEFRHISVREEEKLELQKLMERVPIPIKESIEEHSAKVNVLLQAYISQLKLEGFALMSD
MVFITQSAARLMRAIFEIVLTRGWAQLADKTLTLCKMIDRRMWQSMTPLRQFKKMPDEIA
KKLEKKHFPWSRLYDLEPHELGELIRVPKLGKTIHKFVHQFPKLELSTHIQPITRGTLRV
ELTITPDFQWDEKVHGASEGFWVLIEDVDSELILHHEFFLLKQKYAQDEHQLKFFVPVFE
PLPPQYFLRIVSDRWIGAETQLPVSFRHLILPEKNLPPTELLDLQPLPISALRQPKFESF
YAQRFPQFNPIQTQVFNAVYNSDENVFVGAPTGSGKMTIAEFAIMRLFTTQTEARCVYLV
SEEALADLVFADWHQKFGALDIKVVKLTGETGTDLKLIAKGQLVITTADKWDVLSRRWKQ
RKNVQLVNLFIVDELQLVGGEEGPVLEIVCSRMRYISSQIEKQIRIVALSASLTDARDVA
QWLGCNPNATFNFHPSVRPIPLELHIQGFNVTHNATRIATMSKPVYNAILKYSAHKPVIV
FVSSRKQARLTAIDILTYAASDLQPNRFFHAEEEDIKPFLERMTDKTLKETLAQGVAYLH
EGLSSSDHRLVEQLFDSGAVQLAVVSRDLCWGMSISAHLIIIMDTQFYNGKNHSYEDYPI
TDVLQMVGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDHRMHDHFNAEVV
TKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLSDLEQSKC
ISVEDDMDTLPLNLGMIAAYYYINYTTIELFSLSLNSKTKVRGLLEIISSAAEYEDVVVR
HHEEQVLRTLSQRLPNKLTGPNETAPKFNDPHIKTNLLLQAHLSRLQLGPELQGDTEQIL
SRAIRLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWTKDSYLRQLPHFSVDIVKRCTE
NKIETVFDIMELDDEDRSLLLQLSDAQIADVARFCNRYPNIELNYEVVDKDRINSGSTIN
VVVQLEREYEVTGPVIAPFFPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKVKLDFVA
PSPGKHDYNLYYMSDSYLGCDQEYGFSIEVGDFQSESESESE
NT seq
6429 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgccgcagcacgtcaattgcagtacgagtacaaggcgaactctaatcttgtg
ctgcaagccgatgtacgactcatcgagcgtccacgtcgtgatgaagccactggcgaggtc
tgttccctggtgggaaagttggatggcacgcgaatgggtgaccggtaccagcgcaccaag
ccggaaaagacagaggagcggaaggtgaaacgacagaagcgtgacgaagcccagtacgat
ttcgagcgcatgaagggtgccactctgctctctgagggcattgacgagatggtcggcatt
gtgtaccgcccaaagacacaggagacgcgtcagacctacgaggtgctgctgagtttcatc
caagaggccttgggggatcagcccagagatatcctgtgcggtgcagccgatgagatcttg
gctgtgctgaagaatgatcggctaaaggatcgcgaacgcaagcgggaaacggacagcctg
ctgggcgcggtgacagatgaacgattcgcgttgctggtcaacctgggcaagaagatcaca
gactttggcagcgatgccgtaaacgcactgacagccaccaccaacacggaggagcagatt
gacgagcagtacggcatcaacgtgcagttcgaggagtccgaggaggagagcgacaacgac
atgtatggcgagatacgggacgatgatgtgccagatgagggcgaagaggcgcgcattgat
cacaccctgcacgcagaaaacctggccaatgaagaggctgccagcaatgttaagaaggat
cggatcctccatcccctggacatcgatgcctactggctgcagcgttgcctcagcaagttc
tacaaggatgccatggtgtcgcagagcaagtctgcggatgtgctcaagatcctgaaagat
gccgccgacgagcgggactgcgagaaccagctggtgctgctgctgggctacgattgcttt
gacttcatcaagcagctgaagctgaatcgccagatgatcctctactgcaccatgctggcc
tccgcccagacggacagtgagcgccagcggatacgcgaaaagatgcgcggcaacacgtcc
ctcgcgaaaatcctgcggcagctggacacgggcaagtcggaggagcaggaagagagtgag
acgagaggcaataagcggggcaagggcgatgccgaagatggtggcgcagcagcggccggc
caggtggctggcgtacgtcaactgctggagctggacgagctggccttcacccacggctcc
catttcatggcgaacaaacgctgccaactgcccgacggttcctacaggaagcagcgcaag
ggctacgaggaggtgcacgtccccgcactcaaggccgtaccctttgacgacaacgaggag
ctacagcccatcgataagctgcccaagtactgtcagcccgtcttcgaggggttcaagacc
ctgaatcgcatccagagtcgcctgtacaaggcagccctcgacagcgacgagaatatgctg
ctgtgtgcccccaccggtgcgggaaaaacgaatgtggctctgctcacaatgatgcgggag
atcggaaagcatatcaacgaggatggcaccatcaatacgcaggatttcaagatcatctat
gtggccccaatgaagtctttggtgcaggaaatggttggaaactttggacgacgtctcgcc
tgctataatctcgtcgtgtccgagctgacgggcgaccatcagctgaccagagagcagata
gccgccacccaggtgattgtgtgcacgccggagaagtgggacatcatcacccggaagggg
ggagagcgcacgtttgtcagtctggtgcgtttggtcatcattgacgagatccatctgctg
cacgatgaacgtggtccggtgctggaggcactggtggctcgtaccattcggaatattgag
acgacgcaggaagatgtgcgcctggtggggctatccgccactctgcccaattaccaagat
gtggccacgttcttgcgcgtcaaaccggacaagggcctcttctactttgacaacagctat
cgtcccgtgtccctggagcagcagtacatcggtgtgacggagaagaaggccctcaagcgt
ttccaggtgatgaacgagatcgtctacgagaagaccatggagcatgcgggacggaatcaa
gtgctggtgtttgtccactcgcgcaaggagaccggcaagacggcccgagcggtgagggat
atgtgcctggagcaggacaccttgggcagcttcctgagagagggttcggccagcatggag
gtgctccgcacggaggccgagcaggtaaagaactcggagctgaaggagctccttccctac
ggcttcgccatccatcatgccggaatgacgcgcgtcgatcgtaccttggtggaggatctc
tttgcagatcgtcacatccaggtgctggtatccacggccaccctggcctggggcgtcaat
ctgcccgcacacacggtgatcatcaagggcacgcaggtctacaatccggagaagggacgc
tgggtggagctgagcgcattggatgtcctccagatgttgggtcgtgccggacgaccccag
tacgacaccaagggcgagggcatccttataaccaatcacagcgagctgcagttctacctc
tcgctgctcaaccagcagctgcccatcgagtcgcagttcatctcgaagctgccggacatg
ctcaacgccgagattgtcctcggcacagtgcagcatctgcaggatgccgtcaactggctg
ggctacacgtacctctacatccgcatgctgaggaaccccacgctctatggggtctcgcat
gacgccatcaaggcggatcccctgctggagcagcatcgagcggatctgctgcacacggcc
gcctgttgcctggagcggagcggtctggtcaagtacgagcggaagacgggacactttcag
gtgacggatctcggacgcattgcatcccactattatctcactcacgagacgatgctcaca
tacaaccagctgctgaagcagacgctcagcgagattgagctgtttcgggtgttctcgctg
tcctcggagttccgtcacatttcggtgcgggaggaggagaagctggagctgcagaagctg
atggagcgcgtgcccatacccatcaaggagtccatcgaggagcacagcgccaaggtgaat
gtcctgctgcaggcgtacatttcccaactgaagctggagggctttgccctgatgtcggac
atggtcttcatcacccagtcggctgctcggctcatgagagccatcttcgagattgtcctc
acgcgtggctgggcacagttggccgacaaaacgctgacgctgtgcaagatgattgaccgg
aggatgtggcagtcgatgacaccgctgcggcagttcaagaagatgcccgacgaaatagct
aagaagctggagaagaagcacttcccctggtcgcggctgtacgacctggagccgcacgag
ctgggcgagctgatccgcgtgccgaagctgggcaagaccatacacaagtttgtgcatcaa
ttccccaagctggagctttcgacgcacatccagccgatcacccgaggcacccttagagtg
gagctgaccatcacgccggacttccagtgggacgaaaaggtacatggcgcctcggagggc
ttttgggtgctcatcgaggatgtcgactcggagctgatactgcatcatgagttctttctg
ctgaagcagaagtacgcccaggacgagcatcagctgaagttctttgtgcccgtctttgag
cctttgccgccgcagtactttctccggatcgtctccgatcgctggattggcgccgagacc
cagctgcccgtctcgttcaggcacttgatactgccggagaagaatctaccgcccacggag
ctgctggatctgcaaccgctgccgatcagtgctctgcgtcagccgaaattcgagtcgttc
tacgcgcagcgcttcccccagttcaatcccatccagacgcaggtcttcaacgccgtctac
aacagcgacgagaatgtgtttgtgggcgccccaacaggttccggcaagatgacgatcgca
gagttcgccatcatgcgactgttcaccacccagacggaggcccgctgcgtctacttggtg
tccgaggaggccctcgctgacctggtctttgccgactggcatcaaaagttcggggcactg
gacatcaaggtggtgaagctgacgggcgaaactggaacggatctgaagctgatagccaag
ggacagctggtgatcacgacggctgacaagtgggatgtgctctcgcgacgctggaagcag
aggaagaacgtccagctggtgaatctgttcattgtcgacgaactgcagctggtgggcggc
gaggagggtcctgtgctggagattgtgtgctccaggatgcggtacataagctcgcagatc
gagaagcagatcagaatcgtggccctgtccgcctctctcaccgatgcccgggatgtggcc
cagtggctgggctgcaatccgaatgccaccttcaatttccatccaagtgtgcgacccatt
cccctggagctgcacattcagggattcaatgtgacgcacaatgcgaccagaatcgccacc
atgtcgaagccggtgtacaatgccatcctcaagtacagtgcccacaagccggtgattgtg
tttgtctcctccaggaagcaggcacggctgacggccatcgatatcctgacgtacgctgcg
tccgatctgcaaccgaatcgtttcttccatgccgaggaggaggacatcaagccattcctg
gagcgaatgaccgacaagaccctgaaggagaccctggcccagggtgtggcctacctgcac
gagggtctgtcctcgtcagaccatcgtttggtggagcaactcttcgattcgggcgctgtg
cagctggccgtcgtctcgcgcgatctctgctggggcatgagcatctcggcccatctaatc
atcatcatggacacgcagttctacaacggcaagaatcactcgtacgaggactaccccatc
acggacgtgctccagatggtgggacgcgccaatcggcccaacgaggacgccgatgccaag
tgcgtgctcatgtgccagagcagcaagaaggacttcttcaagaagttcatcaacgagccg
ctgcccatcgaaagccatctcgatcatcgcatgcacgaccacttcaatgccgaggtggtg
accaaaacgattgagaacaagcaggatgccgtggactatctcacgtggacgttcctctac
aggcgattgacccagaatcccaattactacaatctccagggcgtcacacatcgccatctc
tccgatcatctgtccgagctggtggagaacactctcagtgatctggagcagtccaagtgc
atcagtgtcgaggacgacatggataccctgccgctcaatctgggcatgattgcggcctat
tattacatcaactatacgaccattgagctcttcagtttgtccttgaacagcaagaccaaa
gtgcgcggcctgctggagatcatctcgtcggcagcggagtacgaggatgtggtggtcagg
catcacgaggagcaggtcctgcgcactctgtcccagcgcctgcccaacaagctcacagga
cccaatgagacggcacccaaatttaatgatccgcatatcaagaccaatttgctgctccag
gcacatctgtcgcggctgcagttgggacccgaactgcagggcgacacggaacagatattg
agccgggccattcgtctgatacaggcctgtgtggatgttttgagctcgaatggatggctt
tcgccggccgtggctgccatggaactggcccagatggtcacccaggccatgtggaccaag
gattcctacttgcgacaattgcctcactttagtgtcgatattgtcaagcgatgcactgag
aacaaaatcgaaactgttttcgacatcatggagctggatgatgaggatcgttcgcttctg
ttgcagctctccgatgcgcagatagccgatgtggcccgattctgcaatcggtatcccaac
attgagctcaactatgaggtggtcgataaggaccgcatcaattcgggatccacgatcaat
gtggtggtccagctggagcgcgaatatgaggtcaccggccccgtcatcgcacccttcttc
ccgcagaagcgcgaggagggctggtgggtcgttattggtgatcccaagactaattccctg
ctctccatcaaacgcctcacgctccagcagaaggccaaggtcaagctggactttgtggcc
cccagtccgggcaaacatgactataacttgtactacatgagcgactcctacttgggctgc
gatcaggagtacggtttctccatcgaggtgggcgatttccagtcggagagtgagagtgaa
tcggaatag
DBGET
integrated database retrieval system
