Drosophila persimilis: 113566908
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Entry
113566908 CDS
T01063
Name
(RefSeq) histone deacetylase Rpd3-like isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
dpe
Drosophila persimilis
Pathway
dpe03082
ATP-dependent chromatin remodeling
dpe03083
Polycomb repressive complex
dpe04213
Longevity regulating pathway - multiple species
dpe04330
Notch signaling pathway
dpe04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113566908
03083 Polycomb repressive complex
113566908
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113566908
04350 TGF-beta signaling pathway
113566908
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
113566908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpe03036
]
113566908
Enzymes [BR:
dpe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
113566908
Chromosome and associated proteins [BR:
dpe03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
113566908
HDAC complexes
Sin3A-HDAC complex
113566908
BRAF-HDAC complex
113566908
REST complex
113566908
SHIP complex
113566908
MiDAC complex
113566908
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
113566908
Heterochromatin formation proteins
Other heterochromatin formation proteins
113566908
Chromatin remodeling factors
NuRD complex
113566908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Serglycin
Motif
Other DBs
NCBI-GeneID:
113566908
NCBI-ProteinID:
XP_026849914
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MQSHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATDD
EMTKFHSDEYVRFLRSIRPENMTEYKKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAV
KLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDG
VEEAFYTADRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFV
PIISKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVDFVKKYNLPFLMVGGGG
YTIRNVSRCWTYETSVALAVDIANELPYNYYFEYFGPDFKLHISPSNMTNQNTSEYLEKI
KNRLFENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDDRLPQSDKDKRIVAENEYSD
SEDEGEGGRRDNRAYKGQRQRPRLDKDNNSNKASSEASSEIKDEKEKDGADGEESTASNA
NSNSNNNSSSNNKSDNDSSAPASRATTGGGSGSGSGSGSGAKTAKENNI
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctcacagcaagaaacgcgtctgctactactacgacagtgacattggcaactac
tactatggccaggggcaccccatgaagccccaccgcatacgcatgacccacaatctgctc
ctgaactacggtctataccggaaaatggagatttaccgaccacacaaagccactgacgat
gagatgaccaagttccattcggacgagtacgtccgattcctgcggtccatccggccggaa
aacatgaccgaatataaaaagcagatgcagcgcttcaatgtaggcgaagattgccccgtg
ttcgacggtctctacgagttctgtcagctgtcggcgggtggctccgtggccgcagccgtc
aagctgaacaaacaggcctccgagatctgcatcaactggggcggcggtctgcatcatgcg
aaaaaatcggaagcctctggattctgctatgtgaatgatattgttctgggcatcttggag
ctgctcaaataccaccagcgtgttctctacatcgacatcgatgtgcaccacggcgatggt
gtcgaggaggccttttacaccgcggaccgcgtgatgaccgtcagcttccacaagtacggc
gagtacttcccgggcactggcgacctgcgcgacattggcgccggcaagggcaagtactat
gccgtcaatatccccctgcgcgatggcatggacgatgacgcgtacgagagcatcttcgtg
cccataatttcgaaggtaatggagacattccagccggcggcggtggtcctgcaatgcggc
gcggactcccttaccggcgaccggctcggctgctttaacctgacggtgaaggggcacggt
aagtgcgtcgatttcgtaaagaagtacaacctgcccttcctgatggtcggcggcggtggc
tacaccatccgcaacgtctcccggtgttggacgtacgagacgtccgtggcgctggccgtg
gatattgccaacgaactgccctacaactactacttcgagtactttgggcccgacttcaaa
ctgcacatcagccccagcaacatgactaaccagaacacgtccgagtatctggagaagatc
aagaacaggcttttcgagaacctgcgcatgttgccacacgctccgggcgtccagatccag
gccatacccgaggacgcgatcaacgatgaatccgacgatgaggacaaggtggataaggat
gatcgcctgccgcagagcgacaaggataagcgcattgtggccgagaacgagtactcggac
tcggaggatgagggcgagggcggacgacgggacaaccgcgcatacaagggacagcgccag
cgtccgcgactcgacaaggataacaacagtaacaaggcatcctcagaagcgtccagcgag
attaaggatgagaaggagaaggacggcgctgatggcgaagaatcgacggcatccaatgcc
aacagcaacagtaacaacaacagcagcagcaacaacaagagcgataacgattcgagtgcg
ccagccagccgggcaacgactgggggcggctcaggatctggttccggctccggttcgggg
gccaagaccgccaaggagaacaacatatga
DBGET
integrated database retrieval system
