Drosophila persimilis: 6587287
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Entry
6587287 CDS
T01063
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
dpe
Drosophila persimilis
Pathway
dpe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6587287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpe03021
]
6587287
03019 Messenger RNA biogenesis [BR:
dpe03019
]
6587287
Transcription machinery [BR:
dpe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
6587287
Messenger RNA biogenesis [BR:
dpe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
6587287
U7-dependent histone pre-mRNA processing factors
6587287
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
6587287
NCBI-ProteinID:
XP_002013850
UniProt:
B4G5H0
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSQTTNDVRVPDEESDLLQIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALP
YVDLIEADEIDLLFISHFHLDHCGALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKIS
NISTEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYNAGHVLGAAMFMIEIAGIKI
LYTGDFSRQEDRHLMAAEVPPMKPDVLITESTYGTHIHEKREDRENRFTSLVQKTVLQGG
RCLIPVFALGRAQELLLILDEFWSQNPELHEIPIYYASSLAKKCMAVYQTYINAMNDRIR
RQIAVNNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFESWCTDPKNGVII
AGYCVEGTLAKTILSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQTSEFIRLLRPTHV
VLVHGEQNEMSRLKLALQREYEADASTDIKFYNPRNTHAVDLYFRGEKTAKVMGNLAAKN
PEVGSKLSGVLVKRDFKYHLLAPSDLGKYTDMSMSVVTQRQSIPWTSSLGTLELLLDRIG
AGCVEVVEPERKLRVFNCIELTVEQKIIVMEWQATHVNDVYADAVLACIMQSELGGTSLK
GTTKQTKSESSRFRECLIETLQDTFGDSCVPKMFKGDLLPVTVSGKRAEINLETLAVHCA
EDDILRQMLNTTVHKLHQTLVSAH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaccacgaacgatgtccgcgtgccggacgaggagagcgatctgctgcaaatc
aaaccgcttggcgccggtcaagaagtgggacgttcgtgcatcatgctggagttcaaggga
aagaagatcatgctcgactgcggtatacaccccgggctatccggcatggatgcgctgccc
tacgtggacttaatagaggcggacgagatcgacctactcttcatttcacacttccatttg
gatcactgtggggccctgccctggttcctgatgaagaccagtttcaaaggacgttgcttc
atgacgcacgccaccaaggccatttaccgatggatgctctcggattacattaaaatcagc
aacatatccacggagcagatgctctacacagaagccgacctggaggcttcgatggagaaa
atcgagacaattaattttcacgaggagcgcgatgtcatgggcgtccgtttttgcgcctac
aatgctggccatgtgctgggggccgcgatgtttatgattgaaattgcgggcatcaaaatc
ctatacactggcgacttctcacggcaagaggatcgccacttgatggccgcagaggtgccg
cccatgaagcccgatgttcttatcaccgagtccacctacggcacgcacatccacgagaag
cgcgaagaccgcgagaatcgtttcacatcgctggttcagaagaccgttctgcaaggaggt
cgctgcctgattcccgtgttcgccctgggccgagcccaggagttgttattgattttggac
gagttctggtcgcagaatcccgaactgcacgagatacccatctactacgcctcgtcgctg
gccaaaaagtgcatggccgtctaccaaacgtatataaacgccatgaatgaccgaatcagg
cggcagatagccgtcaacaatccctttgtctttcgacacatctccaacctgaagggcatc
gatcacttcgaggacattgggccctgtgtaatcatggcatcgcccggcatgatgcagtcg
gggctgtcgcgcgagctattcgagagctggtgcacagaccccaagaacggcgtcatcatt
gccggctactgtgtggagggcactctggcgaagaccattctctcggagccggaggagatt
accacgctctcgggccagaagctgcccctcaacatgtccgtcgactacatctccttctcg
gcgcacacggactaccagcagaccagcgaattcatacgcctgctgcggcccacccatgtg
gtcctcgtccacggggaacagaacgaaatgtcccgcctgaagctggccctgcagcgcgag
tacgaggccgatgccagcaccgacatcaagttctacaatccccgcaacacacatgccgtc
gatctgtatttccggggcgagaagacagccaaggtgatgggcaatctggcggccaagaac
cccgaggttggcagcaagctatccggcgtgctggtgaagcgcgacttcaagtatcatctt
ctggccccctccgatctcggcaagtacacggacatgagcatgtcggtggtgacgcagcgc
cagtcgataccctggaccagctctctgggcaccctggagcttctgctggatcgcattgga
gcgggctgtgtggaggtggttgagccagaacgcaagctgcgcgtcttcaactgcattgag
ttgaccgtcgagcagaagatcattgtcatggagtggcaggcaacgcatgtcaacgatgtc
tacgccgacgcggttctcgcctgcatcatgcaatccgagctgggcggcaccagcctcaaa
ggcaccaccaagcaaaccaagtcggagagctctcgcttccgggaatgcctcattgagacg
ctgcaagatacattcggcgacagctgtgtaccaaagatgttcaagggggatctgctccca
gtgactgtgagtgggaagcgggcggagattaatctggagaccctggctgttcattgtgcg
gaagacgatattctgcgccaaatgctcaacacaacagtgcataagctccaccagaccctg
gtctcagcccactga
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