Drosophila persimilis: 6588534
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Entry
6588534 CDS
T01063
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dpe
Drosophila persimilis
Pathway
dpe03020
RNA polymerase
dpe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
6588534
09124 Replication and repair
03420 Nucleotide excision repair
6588534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpe03021
]
6588534
03400 DNA repair and recombination proteins [BR:
dpe03400
]
6588534
Enzymes [BR:
dpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
6588534
Transcription machinery [BR:
dpe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
6588534
DNA repair and recombination proteins [BR:
dpe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
6588534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
6588534
NCBI-ProteinID:
XP_002013620
UniProt:
B4G4U0
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MMYDNEEELFEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPAIELQAEAQHTSGEVETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLT
YSAPLYVDITKTKNVEGLDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKTEIRSCLEHSSRPTSTLWVNM
MARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT
QKFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLKKTHVEMLKERDYNNYSWQVLVAS
GVVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSENKRVGDQEENFEKPHRGTCQ
GMRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDSNTKRFAKRDASTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTC
EGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEY
GYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR
ARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECK
GCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgacaacgaggaagagctgttcgaggaggagaatgcagaggagatctcccac
gagttgtggcaggaggcctgctggatcgtaatcaacgcgtacttcgatgagaagggtctg
gtgcggcagcagctggacagcttcgatgagttcattcagatgtctgtgcagcgcattgtg
gaggactcaccggccatcgagctgcaggcagaggcacagcacacatccggggaggtggag
acgccgccgagattctcgcttaagttcgaacagatctatctgtcgaagccgacgcattgg
gagaaggatggttcgcccagtcccatgatgccgaacgaggcgcgtctgcggaacctcacc
tactcggcccccctgtacgtggacatcacaaagacaaagaatgtggagggcctggatccc
gtggagacgcagcaccagaagaccttcatcggcaagattcccattatgctgagatccacg
tactgcctgctctcccagctgacggatcgtgatttgaccgagttgaacgagtgcccgctg
gatcccggcggctactttatcattaacggctccgagaaggtgctgattgcccaggagaag
atggccacaaacaccgtgtatgttttcagcatgaaggatggcaagtacgccttcaagaca
gagatacgctcctgcctggagcatagctcgcgacccacatccacgctctgggtgaacatg
atggcccgaggctcgcagaacatcaagaaatccgccattggccaaaggatcatcgccatc
ctgccgtacattaagcaggagatacccattatgattgtgttccgtgccctgggattcgtg
gccgatcgcgacatcctcgagcacatcatctacgattttgacgatccggagatgatggaa
atggtgaagccatctctggacgaggccttcgtggtgcaggagcaaaacgtggccctcaac
ttcatcggagcgcgaggcgcccggcccggcgtgacgaaggacaagcgtataaagtacgcc
aaggagatcctgcagaaggaaatgctgcctcatgtgggcgtctccgatttctgcgaaaca
aagaaagcgtatttcctcggctacatggtgcaccggctgctgctggcttcgctgggtcgc
cgagagctggacgatcgcgatcattacggcaacaagcgcctggatctggccggacccctc
ctggccttcctcttccgcggcctcttcaagaacctgatgaaggaggtgcgaatgtacaca
cagaagttcatcgatcgtggaaaggacttcaatctggagctggccatcaagacgaacatt
atcaccgacggcctgcgctactccctggccaccggcaactggggcgaccagaagaaggcc
catcaagcgcgtgcaggcgtctcccaggtgctgaaccggctcaccttcgcctccacccta
tcccatctgcgtcgcgttaactcgcccatcggtcgcgacggaaagctggcaaaaccccgc
cagctccacaacacgctctggggcatgctgtgtcccgccgagactccggagggagccgcc
gtcggtttggtcaagaatctggctctgatggcctacatatccgtgggctcacagccgtcg
cccattctggagttcttggaggagtggtccatggagaatctggaggagattgcaccctcg
gcgattgcggatgccaccaaaatctttgttaacggctgctgggtgggcatccatcgggat
cccgagcagctgatggccacgctcagaaaactgcgtcgccagatggacattatcgtgtcg
gaggtgtcaatgatccgtgatattcgcgaccgtgagattaggatctacacggatgcgggt
cgcatctgtcggccgctgctgatcgtggagaatggatcgctgctgctgaagaagacccat
gtggagatgttaaaggagcgcgactacaacaattacagctggcaggtgctggtggcctcc
ggcgtggtggagtacatcgatacccttgaagaggaaacggtcatgatcgccatgtcgccg
tatgatctgaaacaggacaaggactatgcctactgtacgacctacacccactgcgagatt
catccggccatgatcctcggcgtctgcgcctccattatacccttccccgatcacaaccag
agtccgcgtaacacctatcaaagtgctatgggcaaacaagctatgggtgtgtacatcacc
aacttccatgtgcggatggacacgctggcccatgttctatactatcccatgaagccgctc
gtcaccacccgatccatggagtatctgcgcttcagagagctgcccgccggtatcaattcg
attgtggccattctctgctacacgggctacaaccaggaggattctgtcatcctgaatgcc
tcggcggtggagcgaggattcttccggtcggtgttctaccggtcctacaaggattcggag
aacaagcgtgtgggcgatcaggaggagaactttgagaaaccccatcgcggcacctgccag
ggcatgaggaatgcccactacgacaaactggacgacgacggcatcattgcccctggcatt
cgtgtctctggcgacgatgtagtgattggaaagaccatcaccctgccggagaacgacgac
gagctggatagcaacaccaagaggtttgccaagcgagatgcatccaccttcctgcgtaac
tccgagacgggcatcgtggaccaagtgatgctgaccctcaacagcgagggctacaagttc
tgcaagattcgagtgcgctccgtgcgcatcccacagatcggcgacaagtttgcctcccgt
cacggacagaagggaacgtgtgggatccagtatcggcaggaagacatgcccttcacctgc
gagggactggcccccgatatcatcatcaatccccatgccatcccctctcgtatgacaatc
gggcatttaatcgagtgtctgcagggcaagctgggctccaacaagggggaaatcggtgat
gccacgcccttcaacgatgccgtcaacgtgcagaagatctccactttccttcaggagtat
ggctaccatctgcgtggcaacgaagtcatgtacaatggccacacaggacgaaagatcaat
gctcaggtattcttgggacccacatactaccagcgcctgaagcatatggtggacgacaag
atccattcacgtgcccgcggccctgtccagattctagtgcgacagcctatggagggcaga
gcccgtgacggcggcctgcgtttcggtgagatggagcgcgattgccagatatctcacggt
gccgcccagttcctcagggagcgtctcttcgaggtctccgatccgtatcgcgtccacata
tgcaacttctgcggcctgatcgccatcgccaatctgcgcaacaacacgttcgagtgcaag
ggctgcaagaacaagacgcaaatctcccaggtgcgccttccgtacgcggccaagctgctc
ttccaggagctgatgtccatgaacattgcgccccgtctgatggtcaactga
DBGET
integrated database retrieval system
