Drosophila persimilis: 6589019
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Entry
6589019 CDS
T01063
Name
(RefSeq) putative ATP-dependent RNA helicase SoYb isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
dpe
Drosophila persimilis
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpe03036
]
6589019
Enzymes [BR:
dpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
6589019
Chromosome and associated proteins [BR:
dpe03036
]
Eukaryotic type
Gene silencing
piRNA pathway
6589019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
Motif
Other DBs
NCBI-GeneID:
6589019
NCBI-ProteinID:
XP_002014438
UniProt:
B4G7N4
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MFNGNLSKLEENPRCQGNRILITHYVSPQQFWYISAKDVEACSALVRQMELQLLEHCRPV
NQRTSYCEFLEVIVRYMLGSPPKLLRGVIRKRKGEEYLVFALDYGFTINCTARDLWLLPE
NLNKKFYDVQMGGVAFITPYNGSTWTKAALSVFGQKLEEAHLLFLDIKYQGPMNENFGTL
WINSNGQSAQAVDAVVYLEERQYGRRENSSNMPPYLDPLSFDLADINDVELKAGLRATKI
IQLVAAAPPLAIEQNRADCSKALSNTEVRVERNPFRQTSTSNQNYQKRRSQQCPSKDPMK
LDRLLQLRSEQPIPDAARRLSKVSGLDGNSVQTALISESSQKENLEENVEKRNQMEAPGK
LGNESPDRAGPQLASLADRLKVLKLTSRPSMSEGSPGRYSGLLASQETIHTNNQRSEPSE
PRSSSLTASPSAQDMVTRILFKGDATAGKAEGAQPKLFQRINISLASRVLTHSYQPSVSV
DVARNLSEASLGKEIESVLQKLNYRTPLSTQCFAWPHLMKGNSLLLVNASGTGRSWCYLP
GLCSLVMRSMEADGESFKRGPVAVLLTESSVNAKMLANHCSLLMQDFQTPFFKVVNTHDQ
SEVDVVSMLLGSCGVLVSTLANLNALMDYKRKGLPLFDPAYLKHVVLDDYDRMQLAAPHL
LNDVINRLRRLLPSKIQLVLVAQHWHEQAFQKLLQWTPTNLLIFGDFLEASMYGGVNLTM
CVGQAQKKAAQLLKFLASQTPPQKRTIIFCNSQEEMVQLRNVLVGAGHQCLTISKAHAQE
PHELLLVYDDNQLQLRERNKELLVHFSLPESWSKFALRFHVMADRVPNRLAEPLAPPSTI
ASHVMLDESNSLYGPSLLRFLNVHGLSTDNLSEQLSFFQPKGECTLRQEIVRQHLLKADA
QSSSNPCQQSEALVRQHLLKADAQSSSNPCQQSEALVRCRLCKIYDPVHMALWPTEYMLA
GTTAWVEAPFPASRWIAEVELSVGPSSKQHHPVRVSDVCIVHHQGLHKRVRVMDIPTEQS
VIVQLMDHGTELMQIRPWHLLECDAKFTALPLLAMDVKLSCVEPAAGQASWSPESLKWVH
DTFHGLQDGQHILITVDFSMLDVVYVKEIALIEECPSLRTSVYRSVLRKELIARGFGKLA
TKSIDQGPPAPLTCRGLASISEKVKPQVNKEVTKTDINEDQVKVAFADAKDIVTMEASSS
ALKEQNKTLEKADCPSNPPTVDPTLDGSQRTFLELLRGELANENSSSAETRRFLQSIVAG
DEGEGSMAPTETAKAIEKPEPSPIRCVDDASPRTSVQEPSKDQVMKALQCAKTVGETTAW
PMVKWHQTLSQIELIFEQKVSEYELFVRGNFLSYFVSETSPPQRCFMNLLGDVRIASEKQ
HGYSLHVKLSKVGSLFYWPTLLNSLYTQQHSHWLSYDVERAKEPPSPMGLLLWERHMRHV
CTNVESTTEEDSVDSDLSDTAEFDDI
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacggcaacttaagcaagctggaggagaacccccgttgccagggcaatcggatt
ctgatcactcactatgtcagcccccaacagttctggtacatcagtgccaaggatgtggag
gcttgcagtgcgctagtgcgacaaatggagctgcaactgctcgaacactgcaggcccgtg
aaccaacgaacgtcctactgtgagttcctggaggtaattgtgcggtacatgctaggaagt
cccccgaagctgctccgtggcgtcattcggaagcgcaagggagaggagtacctggtgttt
gccctggactatggctttaccattaactgcacagccagagatctgtggttgttgcccgaa
aacctaaacaaaaaattctatgacgttcaaatgggaggagtggcgttcattacgccctat
aatggaagcacctggacgaaggctgcactaagcgtctttggtcagaagctggaggaggcc
cacctgttattcctcgacattaaatatcaggggcccatgaacgagaattttggaacatta
tggataaattcgaacggccaaagcgcccaagctgtggatgcagtcgtctatctggaggag
cgacaatatggacgcagagagaacagcagcaacatgcctccctacctcgatcccttgtcc
tttgacttggcggatatcaacgacgtggagctcaaggcagggttgcgtgccacaaaaata
attcagctagtggcggccgctcctcccttggccatcgaacagaaccgcgctgactgctcc
aaagccctgtccaacacggaagttcgagtggagaggaatccattcagacagacctcaaca
agcaatcaaaactaccaaaagagacgaagtcagcagtgtccctccaaggatcccatgaag
ctggatagacttttgcagctgcgcagcgaacagcccataccggacgcggcccggcgtctg
agcaaggtcagcggcttagacggcaactctgtccaaacggctctcatcagcgaatcgagc
caaaaggaaaacctagaggagaacgtggaaaaaagaaatcaaatggaggcacccgggaaa
ctcggcaatgaatcacccgatagagcaggaccacaactggccagcctggcagatcgatta
aaggtgctcaagctgacgagccgtccctcgatgagtgaaggttctcctggcagatattct
ggattgttggctagtcaggaaaccatccatacgaataaccaacggagcgagccctcagag
ccaagaagtagttccttgactgcctcaccttcagcacaggacatggtcacgcgcattctg
tttaagggagatgccacagctgggaaagccgaaggagctcagccgaaactatttcagagg
ataaacatctcattggccagcagggtgttgacccacagctatcagccatcagtgtcagtg
gacgtcgcccggaacttgagcgaggcatcgctcgggaaggagattgagagcgtcttgcag
aagctgaactaccggactcctttgtccacgcaatgctttgcctggccacacctcatgaag
ggcaactccctgctgctggtgaatgcctcgggcacaggtcgctcctggtgctatctcccg
gggctctgctcgttggtgatgcgctccatggaagcagatggagaaagtttcaagagaggg
ccagtggccgtattgcttaccgaatcctcggtcaacgccaagatgctggccaaccactgt
tctcttctgatgcaggacttccaaactccattcttcaaagtggttaacacccacgaccaa
tccgaggtcgatgtggtctccatgctgctcggctcgtgtggcgtcctggtgtccacactt
gcaaatctgaatgccctgatggactataaacgcaagggcctacccctctttgatccagcg
tatctgaaacacgtagtcctggacgactacgatcgcatgcagctggctgctccacatctc
ctgaacgatgttattaatcggttgcgccgtttgctgccttcgaaaattcagctcgttctg
gtggcccagcactggcatgagcaggcgtttcagaagctgctccaatggaccccgactaat
ctgctgatctttggggacttccttgaggcgtccatgtacgggggcgtgaatttaacgatg
tgtgtgggacaggcacagaaaaaagccgctcagctcctaaaattcttggcctcgcagacg
ccgccacagaagcgaacgatcatattctgcaacagtcaagaggagatggtgcaattgaga
aatgttctggtcggagctggacatcagtgcctgaccatctcgaaagcccacgcgcaggaa
ccacacgaactgctgctggtctacgacgacaaccaactgcagctgcgagagcggaacaaa
gagctactcgtccactttagcctcccggaatcgtggtcgaagttcgctctgcgattccat
gttatggctgatcgggtgccgaaccgtttggccgagccgctggccccgccctccaccatt
gcttcccacgtaatgctggatgagagcaactccctgtatgggccctctttgctgaggttc
ctcaatgtgcacggactctccacggacaatttgtcggagcagctgtccttttttcagcct
aagggcgagtgcactctgaggcaggaaatcgtgcggcagcacttactcaaggcggacgca
cagtcttcgagtaatccttgccagcaatccgaggccctcgtgcggcagcacttactcaag
gcggacgcacagtcttcgagtaatccttgccagcaatccgaggccctcgtgcgctgcagg
ctctgcaagatctacgacccagttcacatggctctctggcccacagaatacatgctggca
ggcactacggcgtgggtggaggcgccctttccggccagtcggtggattgcggaggtggag
ctgagtgtgggacccagctcaaagcagcaccatccagtccgcgtctccgacgtctgcatc
gtgcatcaccaggggctccacaaacgcgtccgtgtcatggacattcccacagaacaatcg
gtgattgtgcaattgatggaccacggcacggagctgatgcagatcagaccctggcacctt
ctggagtgcgatgcgaagtttacagctctaccactcctggccatggatgttaagctgtcc
tgtgtggagcctgcggcaggacaggcaagctggtcgccggagtccctcaagtgggtgcac
gatacgtttcacggtctacaagatggacaacacattctgataaccgtggacttctccatg
ctcgacgtcgtctacgtcaaggaaatcgccctgatcgaggaatgcccctcgctgcgcacc
agtgtgtacagatctgttcttcgaaaggagttgatcgcgcgtggatttggcaaactggcg
acaaaaagcatcgatcagggtccgccggcaccactaacctgcagaggcttggcttcgatc
agcgaaaaagtcaagcctcaggtgaacaaagaagttacgaaaacagatataaatgaagac
caggtgaaagtagcatttgcagatgccaaggacatcgtcacaatggaagccagcagcagc
gcattgaaggagcagaacaaaactctggagaaagccgactgcccgagtaatcccccaacg
gttgatccaactctagacggatctcaacggacgttcctggagctgctaaggggagagtta
gccaacgagaattcgtcaagcgcagagacccgtcgattcctgcaaagcattgtagctggc
gatgaaggggagggttccatggctcccacagaaactgcaaaagcaatcgaaaaaccagag
ccgagtccaattcgttgcgtagatgatgcatcaccaagaacatcagtgcaagagccatcg
aaggatcaggtgatgaaagccctacagtgtgccaagacagttggggagacgacggcctgg
cctatggtcaagtggcaccagaccctcagccaaatcgaactcatttttgagcagaaggtg
tcggagtatgaactgtttgttagggggaactttctgtcgtattttgtgtcggagacctcg
cctccccagaggtgctttatgaatcttctgggcgatgtgaggatcgcttcggaaaagcag
cacgggtactccctgcatgtgaagctgtccaaagttggctccctgttctactggccaact
cttctcaactcgctgtacacgcagcagcatagccattggttgtcctacgatgtggagcga
gccaaggagccgccctcacccatgggcctgcttctgtgggagcgccacatgcgccacgtg
tgcaccaacgtcgaatcgactacggaggaagattctgtcgattccgatctatcagacacg
gcggaattcgatgatatataa
DBGET
integrated database retrieval system
