Drosophila persimilis: 6589311
Help
Entry
6589311 CDS
T01063
Name
(RefSeq) uncharacterized protein LOC6589311
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
dpe
Drosophila persimilis
Pathway
dpe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6589311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpe03000
]
6589311
03019 Messenger RNA biogenesis [BR:
dpe03019
]
6589311
04121 Ubiquitin system [BR:
dpe04121
]
6589311
Enzymes [BR:
dpe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
6589311
Transcription factors [BR:
dpe03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
6589311
Messenger RNA biogenesis [BR:
dpe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6589311
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
6589311
Ubiquitin system [BR:
dpe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
6589311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-RING_2
Ldt_C
zf-UDP
Motif
Other DBs
NCBI-GeneID:
6589311
NCBI-ProteinID:
XP_026844130
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MNGMSNNDDSVECPLCMEPFEVDDLTFFPCTCGYQICRFCWHRIRTDENKLCPACRKEYP
ENPADFKPLSQEEMIAFKSQKRQRDQQRKHKITENRKHLANVRVVQRNLVFVVGLPPRLA
DADILKKHEYFGKYGKIHKVVINPSTTYAGVQGPSASAYVTYVHNADALRAIQSVNNIVI
DGRPIKTSLGTTKYCSHFMKNQQCPKGDCMYLHELGDPEASFTKEQMHQGKHQDYEKRLH
DALIASFGQSSPGIVNGNGTPKTNASNATASSVTPSSSSASAASNATNAVNVQQKEAWPS
LSVSPINGKEATASTNNTNGKNKKDKFRNEKTRHEKVKSKNKNSGSSTSNVSNKENFIPD
PRDIEKLTSTTADTKTSANTSSNLSRTERNKDKESYHEPISNEQKENKQNVKISQTKNEV
ECVKDKDNSIKLKKRESCEIMSQQKRSSSSVQRSLSSCSENSEGHVSESSVSEKSLPDDY
QENKCNISSSETYQENIKNVESINKSRESVNVDGKTVSECKPLINENVSPAVSSTINNGL
YSRESPLNPPDNGNQLSDEVSKLNIFDDTISFFSSSAAFQQSPILKNKQEVEMRQSHLPD
LINDIDGNQKASNTNEWEEAFKNVMLRNNRQVEEQLVQQQNLQQHQHHFHQQVLQQQEEF
LRMHELQKRNDLANNIALTQANTPNADILSHFRGNNSIDANRIQVLQHQLQQNTGENGLS
ANNAFGGNMSKFFDFHKSQQQSHQYPYGHANQVTGNTDVSDQQRVTSQLENGRQNSPYLE
SALNTKSQIQKQRLIGMFETLSQPPNSQSQLNRYSQSTIVDDDLGFDPFIETQKGLAELM
ENEVVQQQSINNGNSALKLQQQAQASHQQRLDNIQRARMPPPGFNHMNSLGFGGPSRLHS
SKMMPFLNSSLVKNSTQAQHQVPQVTNWNANLPAIHPSQGQHIGDAQLQHQIAHNKVYSY
PDWTAMDPAILSFRQFSSFPQNQIPPHPQQQQDMFLQHLVQQPNSQGSSFNTQPQPLLSG
MAMPNNILNGQQLTQPQVNANVQGMLEFLKSRQFV
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcatgagcaacaatgatgactcagtcgagtgtcctttgtgtatggagccgttt
gaagtagacgatctgaccttctttccatgtacctgcggataccagatttgtagattctgc
tggcacagaatccgcacggacgagaacaagttgtgtccggcatgtcgaaaagaatatcct
gaaaatcctgcggactttaagccactatcacaagaagaaatgatagcttttaagtcgcaa
aagcgtcaaagggatcaacaacggaaacacaagataacagagaatcgaaaacatttagca
aacgtacgtgtggttcagcggaacttggtatttgtagtgggcttgccgcctcgacttgcg
gatgcagacatattaaaaaagcacgagtatttcggaaaatatgggaaaattcataaagtc
gtaataaacccgagcaccacatatgccggggtgcagggtccatcagcatctgcctatgtt
acctacgttcacaatgcagatgcacttcgggctatacaaagtgttaataacattgtgata
gatggtcgccctattaaaaccagcttggggacaacaaagtactgtagccatttcatgaaa
aaccaacaatgtcctaaaggcgattgcatgtacttgcacgagctgggagatcccgaagcc
agctttacaaaagagcaaatgcaccagggaaagcaccaggattacgaaaaacgtttacat
gatgctcttattgcatcttttggacagagttcaccaggaattgtaaacggtaatggaact
ccaaaaacaaatgcatcgaatgcgacggcctcttcagtcacaccttcgtcgtcgtctgcg
tcggctgcaagtaatgccacaaatgcagtaaatgttcagcaaaaagaagcttggcctagt
ttatccgtctcgcctattaatggaaaagaggccactgcaagcacaaacaacactaatgga
aaaaataaaaaagacaagtttcgaaatgaaaaaaccagacacgaaaaagttaaatccaaa
aacaaaaatagtggaagctcaacttcgaatgtatcaaacaaggaaaactttattccagac
cccagagatattgaaaaacttacatctacaactgcggatacgaaaacaagtgcaaacacc
tcatccaatctatcaagaacagagagaaataaagacaaagagtcttaccatgagcctatt
tctaatgaacagaaggaaaacaaacaaaatgttaaaatttcacaaacaaaaaacgaggtc
gagtgcgtaaaagacaaggataattcaattaagctgaaaaaaagggaaagctgtgaaatc
atgtcacaacaaaaaagatcgtcttctagcgtgcaaaggtcgttgagctcttgtagtgaa
aatagtgaagggcatgtatcagaaagcagcgtgagtgaaaagagtttacctgatgattac
caggagaacaagtgcaatatttcgagttctgaaacataccaagagaatataaagaatgta
gaaagcatcaataaaagtagggagtcagtgaatgtcgacggtaaaacagtatcagagtgt
aaaccactaataaacgagaatgtaagcccagctgtaagcagcactattaataatgggctc
tattcaagagaaagtccattgaatccaccagataacggaaaccaattgagcgatgaagtt
tccaagcttaacattttcgatgatacaattagttttttttcgtcatcagcagcattccag
caaagtccaattttaaaaaataaacaagaagtggaaatgcgtcagtcccatttgccggac
ttgatcaacgatattgatggaaatcaaaaggcctcaaatacaaatgaatgggaggaagct
tttaaaaatgtaatgcttcggaacaataggcaagtggaggagcaacttgttcagcaacaa
aatctacaacagcaccagcaccattttcatcagcaagtactgcaacaacaggaagaattc
cttcgtatgcacgaattacaaaagagaaacgacttggcaaataatattgcgctgacgcaa
gcaaatactcctaatgctgatatccttagtcattttcgtggcaataactcaattgatgcg
aatagaattcaagtcctgcagcatcaattgcaacagaataccggtgaaaatgggctttcg
gcaaacaatgcatttggcggcaatatgtcaaagttttttgactttcataaaagtcaacag
cagtcccaccagtatccttatggtcatgccaaccaagtcacgggaaatacggatgtgagt
gatcaacaacgagtaacatcacaactggaaaacggtcgacaaaattccccatatcttgaa
tctgcacttaacacgaaatcgcaaattcaaaagcaaaggttaattggaatgtttgaaact
ttgtcccagcctccaaactcgcaatctcaactaaatcggtattctcaaagcactattgtt
gatgatgatttaggtttcgatcctttcattgagactcaaaaaggactagctgagcttatg
gaaaatgaagttgttcaacaacaaagtattaataatggaaactccgcattaaaattacaa
cagcaagcacaagcttcacatcagcaacgtcttgataacattcaacgggctcgaatgccg
cctccgggcttcaatcatatgaattcgttaggtttcgggggtccatctagactgcattct
agtaaaatgatgccatttttgaacagcagtttagtaaaaaatagtacccaagcccagcac
caagtgccacaggtaacaaattggaatgcgaatttaccagcaatacacccaagtcaggga
cagcacattggagatgcacaattacaacatcaaattgctcacaataaagtttatagctat
cctgattggactgcaatggatccagctatactttcattcagacagttttcatcttttcca
caaaaccaaatacccccacatcctcaacaacagcaagacatgtttttacaacatttggtt
caacagccaaattctcaaggtagtagtttcaacactcaaccacaaccacttctttctgga
atggccatgcccaataatattctaaatggacaacagctgacacaaccccaggtcaatgcc
aatgttcaaggcatgcttgagtttttaaaaagccgccaatttgtttag
DBGET
integrated database retrieval system
