Drosophila persimilis: 6589992
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Entry
6589992 CDS
T01063
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X2
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dpe
Drosophila persimilis
Pathway
dpe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6589992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpe03041
]
6589992
03009 Ribosome biogenesis [BR:
dpe03009
]
6589992
Enzymes [BR:
dpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6589992
Spliceosome [BR:
dpe03041
]
Complex A
U2 snRNP components
U2 related factors
6589992
Complex B
6589992
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
6589992
Ribosome biogenesis [BR:
dpe03009
]
Eukaryotic type
90S particles
Helicases
6589992
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
SRP54
Cas3-like_C_2
ResIII
T2SSE
ABC_tran
nSTAND_NTPase5
AAA_25
AAA_30
AAA_7
ATPase
TsaE
PhoH
Motif
Other DBs
NCBI-GeneID:
6589992
NCBI-ProteinID:
XP_002015597
UniProt:
B4GCN9
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MSKRRIEVGETYVSKSKKVADASSTSASASASSVAAAAGTVAQILGGFVPSKQPPTTNAL
TGKTYSQRFQNLYKKRIALPVFEYQADFMRLLSQHQCIVLVGETGSGKTTQIPQWCVDFA
VSKGRKGVSCTQPRRVAAMSVAQRVSEEMDVNLGEEVGYSIRFEDCSSAKTLLKYMTDGM
LLREAMSDPMLEQYQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLIVMSATLDAGKF
QQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQE
EIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEAAPPPNANGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGK
CFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCF
VRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNV
RQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQNVQ
LHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLISLAPQYYDLNNFPQCEAKRQL
ELLQQRMETKQYQKGF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccgcattgaagtcggtgagacatacgttagcaagtccaagaaggttgcg
gatgcgtcgtccacttcggcatcggcatcggcatcgtcggtggcagcggccgccggcact
gttgcacagatcctgggcggatttgtgcccagcaagcagccacctacgacgaatgccctg
actgggaagacttactcgcagcgtttccagaacctgtacaagaagcgaatcgcgttgccg
gtatttgagtaccaggcggacttcatgcgcctgctgagccagcaccagtgcattgtgctg
gtgggcgagacaggctcgggaaagaccacccagataccacaatggtgtgtggactttgcc
gtgtccaaaggaagaaagggtgtctcgtgtacgcagccccgtcgtgtggccgctatgtct
gtggcccagcgcgtgtccgaggaaatggatgtgaatctgggcgaggaggttggctactcc
attcgttttgaggactgctcttcggccaagaccctgctgaagtacatgacggacggtatg
ctgctccgcgaggctatgtccgaccccatgctggagcagtaccaggtgatcctgctcgac
gaggctcacgagcgcaccctcgcaactgacatcctgatgggcgtgctcaaggaggtcatc
cgacagcgcaatgatcttaagctgattgtcatgtcggccactctcgatgctggcaagttc
cagcagtacttcgacaacgctcccctaatgaacgtgcccggtcgcacgcatcccgtggag
atattctatacgccggagccggagagggactacttggaggcagccattcgcacagtcatc
cagatacatatgtgcgaggagattgagggtgacattctcatgttcctcacgggtcaggag
gagattgaggaggcctgcaagcgcatcaaacgggaaatcgacaacctgggctcagagatt
ggcgagctgaagtgcattcccctgtactctacgctgccgccaaatctgcagcagcgcatc
ttcgaggcggcgcccccgccgaatgccaacggagccattggccgcaaagttgtggtgtcc
accaacattgcggaaacctcgctgacaatcgatggtgtggtatttgtgattgacccgggc
tttgcgaaacagaaggtctacaatcctcgcatccgcgttgagagcttactggtctcgccc
atttccaaggcttcggcccagcagcgggctggtcgagccggtcgtactcgtcccggcaag
tgcttccgactttacacggagaaggccttcaagaacgagatgcaagacaacacctatccc
gagattctcaggtccaatttgggcactgtggttctccagcttaaaaagctaggcatcgac
gacttggtgcactttgactttatggatccccctgcaccggagacccttatgcgagcgctg
gagctgctcaactatctggccgccctggacgacgatggcaacctgacagacttgggggca
gtcatgtccgagttccccctggatccgcagctcgccaagatgctgatagccagctgccag
cacaactgctccaacgagatactttccataacggccatgctgtcggtgccacaatgtttc
gtgcgtcccaatgaggccaagaaggcggccgacgaggccaagatgcggttcgcacacatc
gatggggatcatttaaccttgctgaatgtctaccatgccttcaaacagagcagtgaggac
cccaactggtgctatgaaaacttcataaacttccggtcgctgaagagcgctgacaacgtg
cgccagcagctggcccggattatggatcgcttcaacttgaggcgcaccagcacggagttc
acctcaaaggactactatgtgaacatacgcaaggccctcgtccagggcttcttcatgcag
gtggcccacctggagcgcaccggtcactatctgactatcaaggataaccagaatgtgcag
ctgcacccctcgacctgtctggaccacaagcccgattgggtcatctacaatgagtttgtg
ctaaccaccaagaactacatacgcacggtcacagatgtaaagcctgaatggctgatcagc
ctggccccgcaatactacgacctgaacaacttccctcaatgcgaggcgaagcgtcagttg
gagttgctgcagcagcgaatggaaaccaagcagtaccagaagggattttaa
DBGET
integrated database retrieval system
