Drosophila persimilis: 6590892
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Entry
6590892 CDS
T01063
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
dpe
Drosophila persimilis
Pathway
dpe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6590892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpe03041
]
6590892
Spliceosome [BR:
dpe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
6590892
Complex C
U5 SnRNP specific factors
6590892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
6590892
NCBI-ProteinID:
XP_002015433
UniProt:
B4GBU4
LinkDB
All DBs
Position
Unknown
AA seq
2397 aa
AA seq
DB search
MSIPPYMIPQNAWAAQLMAQQAYAAAHAQQAQLHAQQQMANQIQQIPPPGAPLPPASGHS
NGIPIPAACQGQSGLGQIPTPKPDILTEDKLQEKALKWQNLQSKRFAEKRKFGFVDTQKE
DMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVQVL
YHITGAITFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYA
DNVLDVEPLEAIQIELDNDEDNAVYKWFYDHRPLVDTPYVNGSTYRKWNLSLPQLATLYR
LANQLLTDLVDNNFFYLFDPKSFFTAKALNMAIPGGPKFEPLIKDNNVGDEDWNEFNDIN
KVIIRQPIRTEYRIAFPYLYNNMPHFVHLSWYHTPNVVYIKTEDPDLPAFYFDPLINPIS
HRNVNSKLQEPLPDDDEDFTLPDEVQPFLQDTPLYTDNTANGIALLWAPRPFNMRSGRSR
RAIDVPLVKCWYKEHCPPGHPVKVRVSYQKLLKYYVLNALKHRKPKPQKKRYLFRSFKAT
KFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSR
FGNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLM
RQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQ
FEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRC
WKANIPWKVPGLPIPIENMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRL
TRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLL
ILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFM
DLYSHLIPVYEVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPSDTEPPPLLAYKWCQGI
NNLQEVWDVGEGECNVLLESRFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINY
KDMNHTNSYGIIRGLQFSSFITQYYGLVLDLLVLGLHRSSEMAGPPQMPNDFLTFQDAVT
ETAHPIRLYCRYVDRIHLFFRFSAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDAR
MRLMKHDVNLGRAVFWDIKNRLPRSVTTIGWESTFVSVYSKDNPNLLFNMSGFECRILPK
CRTQNEEFTHRDGVWNLQNEITKERTAQCFLRVDDESLGRFHNRVRQILMASGSTTFTKI
VNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTP
KELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEF
IDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIR
TEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWE
GLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTG
IFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKS
YKMNSSCADILLFPAYKWNVSRPSLLADTKDTMDNTTTQKYWLDIQLRWGDYDSHDVERY
ARAKFLDYTTDNMSIYPSPTGILIAIDLAYNLHSAYGNWFPGCKTLIQQAMAKIMKANPA
LYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLT
TKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPK
QIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNL
YDDWLKTISSYTAFSRLILILRALHVNTERTKIILKPDKTTITEAHHIWPTLTDEEWIKV
EVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQNQL
TATTTRTTNKHGDEIITSTTSNYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKE
TGYTYILPKNILKKFVTISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTINL
PNTLPTHQYLKDMEPLGWIHTQPNELPQLSPQDITTHAKIMQENSNWDGEKTIVITCSFT
PGSCSLTAYKLTPSGFEWGSKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQSSW
NYNFMGVRHDPNMKYELQLANPKEFYHELHRTSHFLLFSNLEDGGDGAGADREDVYA
NT seq
7194 nt
NT seq
+upstream
nt +downstream
nt
atgtccattccgccgtacatgataccacaaaatgcatgggccgctcaattgatggcccag
caggcatacgcggctgcacacgcacagcaggcacaattgcatgcgcagcagcagatggcc
aaccagatacaacaaataccaccaccaggagcacccttaccgccagccagcggccattct
aatggcataccaattccggccgcatgccaggggcagtctgggctggggcaaattcccacg
ccaaagccggacatacttacggaggataaactgcaggagaaggcgctaaagtggcagaat
ctgcagtccaagcgtttcgctgagaagcgaaagttcggcttcgttgacacacagaaggag
gacatgccgccggagcatataagaaaaattatacgcgatcatggtgacatgacctcgcgc
aagtatcgccatgacaagcgggtttatttgggcgctctgaagtacatgccacatgcagtg
ctgaagctgctggaaaatatgcccatgccatgggagcagatccgggacgtacaggtgctg
taccatatcactggtgccataacctttgttaacgaaataccatgggttattgagccggtt
tacattgctcagtggggaacaatgtggataatgatgcgtcgcgagaagcgtgatcgtcgc
cacttcaagcgtatgcgatttccgccgtttgacgatgaagaaccgccgctggactatgcg
gacaacgtactggatgtggagccattggaagccattcaaattgagctcgataatgatgaa
gacaatgccgtgtacaaatggttctacgaccatcgtcccctcgtagacacgccctatgtg
aatgggtctacctaccgcaagtggaatctgtccctgcctcaattggctactctttatcgc
ctggcgaaccagttgctcacggacctggtcgataacaacttcttttacctatttgacccg
aagagtttctttaccgcgaaggctctgaacatggctataccgggcgggcccaaattcgag
ccactcatcaaggataataatgttggcgatgaggactggaacgagttcaacgacataaat
aaggtgatcatccgccaaccaattcgcacggagtatcgtattgcttttccctacctgtac
aacaatatgccgcactttgtgcatctaagctggtatcacacacccaacgtggtctacatc
aagactgaagatcccgatttgcctgcgttttactttgatccgctcatcaatcccatttcg
catcgcaatgtaaattccaagctgcaggaacccctgcctgatgacgatgaggactttacg
ctcccggatgaagtgcagccgttcctgcaggacacgccgctttacaccgacaacaccgcc
aatggaattgctttgctatgggctccgcgccctttcaacatgcgttccggtcgctcccgt
cgagccattgatgtgccgttggtcaagtgctggtacaaggagcactgtccacctggccat
ccggtaaaggtgcgcgtcagctatcagaaattgctgaaatattatgtactaaatgctctg
aagcaccgaaagcccaagccgcaaaagaaacgatacctgttccggtccttcaaggccaca
aagttcttccagaccaccacgttggattgggttgaggctggattgcaggtgtgccgtcag
ggatacaacatgctaaatctcttgattcatcgcaaaaatcttaactatttgcatctggac
tataatttcaacttgaagccggtcaagacattgactaccaaagagcgcaaaaagtcacgt
ttcggcaacgcgtttcatttgtgccgagagatcctgcgtctgaccaagctcatcatcgac
tcccacgtgcagtatcgcttgaataatgtggatgctttccagctatccgatggcctgcag
tacatattcgcgcatgtcggtcagctcactggcatgtatcgttataagtacaagctgatg
aggcagataagaatgtgcaaggatctgaagcatttgatctactaccgctttaatacggga
cccgtgggcaagggacccggttgtggtttctgggcacccggatggcgggtgtggctgttc
tttatgcgcggcatcactcccctgctggaacgttggctgggaaatctgctgtctcgtcag
ttcgaaggacgccactccaagggcgtagccaaaaccgtgaccaagcagcgcgtcgagtcg
cacttcgatctggagctgcgagcctctgttatgcacgacatcgtggacatgatgcctgag
ggcattaagcaaaacaaggctcgcaccattctgcagcatctgtcggaggcttggcgctgc
tggaaagccaacattccgtggaaggtacccggcctccccatacccatcgagaatatgatc
ctccgctatgtgaaaatgaaggcggactggtggacaaacacggcccactacaaccgagag
cgcatccgacgaggtgctaccgtggataagaccgtatgtaagaagaatctgggccgcctc
actcgtctctacctgaaggcggagcaggaaagacaacacaactacctcaaggatggtcca
tacatatcgccagaggaggcggtggccatctacaccaccacagtgcactggctggagtca
cgtcgctttgcgcccatcccattccctccgctgtcctacaagcacgacacaaaattgctg
atccttgcactcgagcgactaaaggaggcctacagcgtgaagtcgcgcttgaatcaaagc
cagcgtgaggagcttggtctcatcgaacaagcctacgataatcctcacgaggcattgtct
cgtatcaagcgccatctgctgacgcagcgggctttcaaagaggtggggattgagttcatg
gacctgtacagccatctgatacccgtgtatgaggtggaaccgctggagaagatcacggac
gcatatctcgaccagtacctctggtacgaggcagacaagcggaggctgtttcccccctgg
atcaagcccagcgacacagagcctccgccgctcctggcctataagtggtgtcaaggcatc
aacaatcttcaggaggtctgggatgtgggcgagggcgaatgcaatgtgctgctggagtcg
cgctttgagaagctatacgagaagattgacttgaccctgcttaaccgtcttctgcgcctg
atcgtggaccataatatcgccgattatatgacggcgaagaacaatgttgtgatcaactac
aaggacatgaaccacaccaacagttatggcatcatccgtggcctgcagttctcctcgttc
ataacgcaatactatggcttggttctggacctcctggtgctgggcctgcatcgatccagc
gagatggccggccctccgcaaatgcccaatgattttcttacctttcaggacgcagtcacg
gagacggcacatcctattcggctgtattgtcgctacgtcgatcgcatacacttgtttttc
agattctcggcggaggaggcgcgagacctcatccagcggtatctcaccgagcatcccgat
cccaacaatgaaaacattgtcggctacaacaacaagaaatgctggccccgcgatgctcgt
atgcgtttaatgaaacacgacgtcaatctaggccgcgccgtcttctgggacattaagaac
cgcttgccgcgctctgttaccaccattggctgggaaagcacctttgtttcggtctattcc
aaggacaatccgaacttgctgttcaacatgagcggctttgagtgtcgaatcttgccaaag
tgtcgcacccaaaacgaagagttcacacatcgcgatggcgtgtggaatctgcagaacgaa
ataaccaaggagcgcacagctcaatgcttcctgcgtgtggacgatgaatcgctgggacgc
ttccacaatcgggtgcgccagatcttgatggcttccggttccaccacgtttacaaagatt
gttaacaaatggaacacggccctcattggcctgatgacgtacttccgcgaggctgttgtc
aatacccaggagttgctggatctactggtcaagtgtgaaaacaagattcagacgcgcatc
aagattggccttaactcgaaaatgccctcgcgctttccacccgtcgtgttctacacccca
aaggagctgggaggtctcggcatgttgagcatgggccacgttctcattccgcaatccgat
ctgcgctggtccaagcagacggatgtgggaataacccacttccgatcgggcatgtcccat
gacgaggatcagcttattccgaatctgtatcgctacattcagccgtgggagagtgagttc
atcgattcgcagcgcgtctgggcggagtatgcgctgaagcgccaggaggcaaatgctcag
aaccgtcgcctcacgctggaggacctcgaggacagctgggatcggggtattcctcggatc
aacacgcttttccagaaggaccgccacactctggcctatgacaagggctggcgcatacgc
accgagttcaagcagtatcaggtgctgaagcaaaaccccttctggtggacccatcaacgc
cacgacggcaagttgtggaacctgaacaactatcgcacggatatgatccaagcgctgggc
ggcgtggagggaattctcgagcacactctgttcaagggcacctatttccccacctgggag
ggtctgttctgggagaaggcctctggcttcgaggagtccatgaagtacaagaaactgacc
aatgcacagcgctctggtctgaatcagatcccgaatcgtcgcttcacactctggtggtcc
ccgacgatcaaccgcgccaatgtctatgtgggcttccaggtgcagttggatctgactggc
atattcatgcatggcaaaattccgacgctcaagatttcgctgattcaaattttccgtgcc
catttgtggcagaagatacacgagtccattgtgatggacttgtgccaggtgtttgatcag
gagctggacgctcttgaaatcgaaacggtgcagaaggagacgatccatccgcgtaagtcc
tacaagatgaactcctcctgtgccgacattttactcttccccgcctacaagtggaacgtg
tcgcgaccctctctgctggccgacaccaaggacaccatggacaacacgaccactcagaag
tattggctagacattcagctgcgctggggagactatgattcccacgatgtggagcgttac
gcgagggccaagttccttgattacaccacagacaacatgtccatttatccctcgcccacg
ggtatcctgattgccatcgatctggcctacaatctgcactcagcatatggaaattggttc
cctggctgcaagactctcatccagcaggccatggccaaaatcatgaaggccaatccggcc
ctctatgtcctgcgcgagcgcatccgcaaggctctgcagctgtactcctcagagccaacg
gaaccctacttgagctcacagaactatggcgaacttttctcaaatcagatcatctggttt
gtcgacgacaccaacgtgtaccgcgtcaccatccataagacattcgagggcaatctgaca
acgaagccgataaacggcgcaatctttatattcaatccccggacgggccagcttttccta
aagattatccacacttcggtatgggcggggcagaaacgtttgggtcagttggccaagtgg
aagacggctgaagaggtggctgccctgattcgctcgctgcccgtggaggagcagccgaaa
cagatcattgtgacgcgcaagggtatgcttgatcctctcgaggttcatttgctcgacttt
cccaacatcgtcatcaaaggctctgagctgcagttgcccttccaggcctgcttgaaagtg
gagaagtttggtgatctgattctgaaggccaccgagccccaaatggtgctctttaatctt
tacgacgactggctgaagacaatttcctcgtacacggcgttcagccgtctcattttgatc
ctacgagccctgcatgtgaatacggagcgcaccaagatcatcctaaagccagacaagacc
actattaccgaggcccatcatatctggccaacattgacggatgaggagtggatcaaggtg
gaggtgcagctcaaggatctcattttagccgactacggaaagaagaacaacgtgaacgtg
gcctcactcacacagtcggagatccgcgacattattctcggcatggagatcagtgcgcca
tcggcgcaacgtcagcagatagcagagatcgagaagcagacaaaggagcagaatcaactg
acggcgaccaccacgcgcaccacaaacaaacacggcgacgagatcatcacttccaccaca
tccaattacgagacgcagactttcagctcgaagactgagtggcgcgtgcgagccatctct
gccacgaatctgcatttgcgaacgaatcacatatatgtcagctccgatgacatcaaggaa
actggctatacttacattctgcccaagaacatactcaagaagttcgtcaccatctccgat
ttgagagcacagattgcgggatatctttacggcgtaagtccgccggacaacccgcaggtg
aaggagattcgctgcattgtgatgcctccacaatggggaacgcaccagacaattaacctt
cccaacaccctgcccacccatcagtaccttaaggacatggaaccgttgggctggatccac
acgcagcccaacgagttgccgcagctatcgccgcaggatatcacgacccatgccaagatc
atgcaggagaactccaactgggacggcgaaaagacgattgtaattacctgctcctttact
cccggctcttgctcgctgaccgcttacaaactgaccccgtcgggcttcgagtggggctct
aagaacacggacaagggaaacaaccccaagggctacctgccttctcactacgaaagagtt
cagatgctgctgtcgaacaagttccttggcttcttcatggtgcccgcgcagagcagctgg
aactacaatttcatgggagtgcggcacgatcccaacatgaagtacgaactgcagctggcc
aacccaaaggagttctaccacgaactgcaccgcacgtcgcacttcctgcttttctcgaac
ctcgaggatggtggcgatggcgccggcgcggatcgtgaggatgtctatgcgtag
DBGET
integrated database retrieval system
