Drosophila persimilis: 6592654 Help Entry 6592654           CDS       T01063                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism dpe  Drosophila persimilis Pathway dpe03040   Spliceosome Brite KEGG Orthology (KO) [BR:dpe00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     6592654  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dpe03019]     6592654    03041 Spliceosome [BR:dpe03041]     6592654 Messenger RNA biogenesis [BR:dpe03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      6592654 Spliceosome [BR:dpe03041]  Complex B   Other components    Prp19-related factors     6592654  Complex C     6592654 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf TPR_2 Mad3_BUB1_I TPR_12 TPR_15 TPR_8 PPR RPN7 TPR_10 ARM_TT21 ARM_TT21_C Motif Other DBs NCBI-GeneID:  6592654 NCBI-ProteinID:  XP_002017990 UniProt:  B4GH59 LinkDB All DBs Position Unknown AA seq 883 aa AA seqDB search MVAKTGKTSNAELNFEEEDVPYEEEILRNAYSVKHWLRYIDHKAKAPNNGVNLVYERALK ELPGSYKIWYNYLRTRRKQVRGKIPTDPMYEQVNNTFERALVFMHKMPRIWIDYGVFMTT QCKVTRTRHVFDRALRALPITQHGRIWPLFLKFVQRFDMPETALRVYRRYLKLFPEDAEE YVEYLQQVEKLDEAAQQLADIVDNEHFVSKHGKSNHQLWNELCDLISKNPHKVHSLNVDA IIRGGLRRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDEYAQF EELSLNKRMEEVAKNEEATEEDDIDVELRLSRFEYLMERRLLLLNSVLLRQNPHNVHEWH KRVNLYEDKPTEIINTYTEAVQTVQPKLAVGKLHTLWVEFAKFYESNGQVEDARVVFERG TEVEYVKVEDLAAVWCEWAEMELRQQQFEAALKLMQRATAMPKRKVAYHDDSETVQSRLH RSLKVWSMYADLEESFGTFKTCKAVYERIIDLKICTPQVIINYGMFLEEHNYFEEAYRAY EKGIALFKWPNVYDIWNSYLSKFLARYGGTKLERARDLFEQCLDQCPAEHAKYFYLLYAK LEEEHGLARHAMSVYDRATSAVKEEEMFDMYNIFVKKAAEIYGLPRTREIYEKAIEALPE QHMRHMCVKFAELETKLGEVDRARAIYAHCSQVCDPRITADFWQTWKEFEVRHGNEDTMR EMLRIKRSIQATYNTQVNMMAAQFVNTNTNGVAADAGAGSGPDAMRLLEEKARQAAAEAK QKPAEKAASNIMFVRGETQGGAKGKENTVVNPDEIDIGESEDDDEEEEDAQQPSGDQAEA GQATTKTDDEGLIMKKLRFEQKAIPAKVFGSLKPTNQSDSDEG NT seq 2652 nt NT seq  +upstreamnt  +downstreamnt atggtggcaaaaaccggcaaaacctcaaatgcggaactcaattttgaagaggaagatgtg ccctatgaggaggaaattctgaggaatgcctactccgtgaagcactggcttcgctacata gatcacaaggccaaggcgcccaataatggtgtgaatctggtgtacgagcgcgccctgaag gagctgcccggcagctacaagatttggtacaactatctgcgaacgcgaaggaagcaggtc cgtggaaagatacccacagatcccatgtacgagcaggtgaacaacacgttcgagcgggcc ctcgtcttcatgcacaagatgccgcgcatctggatcgactatggcgtcttcatgaccacc caatgcaaggtgacccgcacgcggcacgtcttcgaccgggcgctgagggcactgcccatc acacagcacggcaggatctggccgctgttcctgaagttcgtgcaacgcttcgacatgccc gagacggcgctgagggtgtatagacgctatctgaagctgtttccggaggatgccgaggag tatgtggagtacctgcagcaggtggagaagctggacgaggcggcccagcagctggccgac atagtggacaacgagcatttcgtgtcgaagcacggcaagtcgaaccaccagctgtggaac gagctgtgcgacctcatctcgaagaacccgcacaaggtgcactccctgaatgtggacgca atcatcagaggcggcctgcggcggtacacagatcagctcggacacctgtggaactccctg gccgactactatgtgcgctcggggctgttcgaccgggccagggacatctacgaggaggcc attcaaacggtgaccacagtgcgggacttcacccaagtttttgacgagtacgcgcagttc gaggagctgtcgttgaacaagcgcatggaggaggtggccaagaacgaggaggccaccgag gaggacgacatcgatgtggagctgcgcctgtcgcgcttcgaatacctcatggagaggcgt ctgctgctgctgaacagtgtcctgctgcgccagaatccgcacaacgttcacgagtggcac aagcgggtcaacctgtacgaggacaagcccacggagatcatcaacacctacacagaggcc gtgcagacggtccagcccaagctggcggtgggaaagctgcacaccctctgggtggagttt gccaagttctacgagtccaatggccaggtggaggacgcccgcgtggtcttcgagcggggc accgaggtggagtacgtcaaggtggaggatctggccgccgtgtggtgcgagtgggcggag atggagctgcgccagcagcagttcgaggcagccctcaagctgatgcaacgtgccacggcc atgcccaagcggaaggtggcgtatcacgacgactcggagacagtgcagtcgcgcctccac agatccctgaaggtgtggtccatgtacgccgatctggaggagtcctttggcaccttcaag acctgcaaggccgtctacgagcgcatcatcgacctgaagatctgcacgccgcaggtgatc atcaactatggcatgttcctcgaggagcacaactacttcgaggaggcctatcgggcctac gagaagggcattgccctgtttaagtggccgaatgtgtacgacatctggaactcgtatctg agcaagttcctcgcgcgctatgggggcacaaagctggagcgggcccgcgacctcttcgaa cagtgcctggatcagtgtcccgctgagcatgccaagtacttttacctgctctacgcgaag ctggaggaggagcacggtctggcccggcatgccatgtccgtctacgatcgcgccacgtcc gccgtcaaggaagaggagatgttcgacatgtacaacatattcgtgaagaaggccgccgag atctacggcctgccacgcaccagggagatctacgagaaggccatcgaggccctgcccgag cagcatatgcgccacatgtgcgtcaaattcgccgagctggagacgaagctgggcgaggtg gatcgagccagagccatctacgcccattgctcacaggtgtgcgatccccgcatcacggcc gacttctggcagacctggaaggagttcgaggtgcgacatggcaacgaggatacgatgcgt gaaatgctgcggatcaagcgctccattcaggccacctacaacactcaggtcaacatgatg gctgcgcagtttgtcaacacgaacacgaatggtgtggctgccgatgctggtgctggctcc ggaccggatgccatgcggctgctcgaggagaaggcccgccaggcggcggccgaggccaag cagaagcccgccgagaaggctgcctccaatatcatgtttgtgcgtggcgagacccagggc ggggccaagggcaaggaaaatacagtcgtcaatccggatgagattgatattggcgaaagc gaggacgacgacgaggaggaggaggacgcgcagcagccgagtggagaccaggccgaggca ggccaggccacaaccaaaaccgatgacgagggcctcatcatgaagaaactgcgcttcgaa caaaaggccataccggccaaggtctttggcagcctcaagccgacaaatcaatccgattcc gatgagggataa

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