Drosophila persimilis: 6598068
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Entry
6598068 CDS
T01063
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
dpe
Drosophila persimilis
Pathway
dpe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6598068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpe03041
]
6598068
Enzymes [BR:
dpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
6598068
Spliceosome [BR:
dpe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
6598068
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
WHD_HA2
HA2_C
Helicase_C
DEAD
AAA_22
Flavi_DEAD
AAA_19
nSTAND3
AAA_30
Cas3-like_C_2
SRP54
nSTAND_NTPase5
T2SSE
TsaE
Motif
Other DBs
NCBI-GeneID:
6598068
NCBI-ProteinID:
XP_002023127
UniProt:
B4GXE4
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MSSRSRKRTAGSSSSAEEPDSEEESRLKDLQERDEFANRLKQRDEDRTRKVVDSAGGRKA
IEEATKRLKLEHEDRDKIVPHLRLQSRRQYLEKRKDDKVAELEADILDDEYLFEESVLTK
REREERQYKKQLLNIAKEHEKARELERVQRYHMPQDMKKGERSEYVEVDDFERQPNPEQK
KWEAEQLASARFQFGAKDVKAEEEYELLLDDQIDFIQALTLDGSREKSSSRQPELTEKER
KRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLIDAGFTKDKKM
IGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLS
EPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDADKFSAFFDDA
PIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEV
LQDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIV
YVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHEL
EDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGE
LTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTISAMLSVNSAIFYRPKDKIIHADTA
RKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEI
DMVSCLPETINVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLFEELPRWVLY
HELVFTSKEYMRQVIEIESKWLLEVAPHYYKAKELEDSTNKKMPKGAGRAEMTQ
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcagaagcaggaaacgtacggctggcagcagcagcagtgctgaggagccggac
agcgaggaggaatcgaggttgaaggacttgcaggagcgagatgagttcgccaatcgtctg
aagcagcgggatgaggaccgcacacgcaaggtggtagactccgccggtggccgcaaggct
atcgaggaagccaccaaacgcttgaagctggagcacgaggatcgggacaagatcgtgcca
cacctgcgcctgcaatcgcgacgccagtaccttgaaaagcgcaaggatgacaaagtggcc
gagctggaggcggatattttggacgacgagtatctcttcgaggagagcgtgttgaccaag
cgcgagcgggaggagcgccagtacaaaaagcagctgctgaacatcgccaaggagcatgag
aaggcgcgggagctagagcgcgtacagcgctatcacatgccgcaggacatgaagaaaggc
gagcgctctgagtatgtcgaggtggacgacttcgagaggcagcccaatcccgagcaaaag
aagtgggaggccgagcagttggcctcagcccgtttccagtttggcgccaaggacgtcaag
gccgaggaggagtatgagctgctgttggacgatcagattgatttcattcaggccctgacg
ctcgacggcagtcgcgaaaagtcctccagccgccagccggagttaacggaaaaagaacgc
aaacggctgacactggacgagacgcgtcgctcgctgcccgtgtatccgttcaaagaggat
ctcattgccgctgttaaggagcatcaggtgctgatcattgagggtgaaaccggttcgggc
aagaccacccaggtgccacaatacctgatcgatgcgggatttaccaaggacaagaaaatg
attggctgcacgcagccgcgtcgcgtggctgccatgtctgtggcggctcgcgtagccgag
gagatgggcgtcaagctgggcaacgaggtgggctacagcatacgcttcgaggactgcacc
tcggaccgaaccatcctaaagtacatgacggacggtacgctgcatcgtgagtttctctcg
gagcccgacttggcctcatacagtgtgatgatcattgacgaggcccacgagcgcactctg
catacggacatcctctttggcctggtcaaggacattgctcgcttccggccagagcttaag
ctgctcatatcgagcgccacccttgacgcggacaagttctcggccttcttcgatgatgcg
ccgatcttccgcatccccggaagacgatatccggtggacatattctacacaaaggcgccg
gaggcggactatattgatgcctgctgcgtttctgtgctgcagatacacgccactcaaccc
ttgggcgatatattggtgtttctgacgggtcaggatgagatcgagacctgccaggaggtt
ttgcaagaccgcgtcaagcgtctgggctcgaaaatccgcgagctgatcgtcattcccgtc
tatgccaaccttccaagcgacatgcaggctaaaatcttcgagcccacgcccccgaatgcc
cgtaaagtgatcctggccaccaacatagcagagacctctctgacgatcgacaacattgtc
tatgtgatcgacccggggtttgccaagcaaaacaacttcaattcgcgcaccggcatggag
tccctgatggtggttcccatttcgaaggcatcggcaaatcagcgagccggtcgagctggg
cgcaccgcgccgggcaagtgcttccgtctgtacacggcatgggcgtacaagcatgagctg
gaggacaacacggtgccggagatacagcgcatcaatctgggcaacgcagtgcttatgctc
aaggccttgggcataaacgatttgatacactttgactttttggatccaccccctcacgag
acactcgtcctggccctggaacagctctatgctctgggtgctctcaatcatcatggggag
ctgaccaagctgggtcggcgaatggccgaatttcctgtggatcccatgatgggcaagatg
ttgctggccagcgaaaagtacaaatgttctgaggagatggtcacgatttcggcaatgctg
tcggtgaacagtgccatcttctatcggcccaaagacaagatcatacacgcggacacggcc
cgcaagaacttcaaccacatgcacggcgaccacctgagcctgctgcaggtctacaatcag
tgggcggagacggactacagcacgcagtggtgctacgaaaacttcatccagtaccgctca
atgaagcgggcgcgcgatgtccgggagcagctggtaggcctgatgcagcgcgtcgagatc
gacatggtcagttgcctgccggagactataaatgtgcgcaaggcggccactgccggatat
ttctaccatgtggcgcgcctctccaagggcggccactacaagaccatcaagcacaaccag
acggttatgattcatccgaattcttcgcttttcgaggagctgccccgctgggttctctac
catgagctggtcttcacctccaaggagtatatgaggcaggttattgagatcgaaagcaag
tggctgctggaagtggcccctcattactacaaagcgaaggagttggaggactcgacgaac
aaaaagatgcctaagggcgctgggcgggccgaaatgacacaataa
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